Gene Swit_2130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2130 
Symbol 
ID5198933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2391476 
End bp2391673 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content74% 
IMG OID640581675 
Producthypothetical protein 
Protein accessionYP_001262627 
Protein GI148555045 
COG category[S] Function unknown 
COG ID[COG4877] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.439751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGA GGAAGGCCTA TCCGCTGCGC ATCGACCAGC CGCTGTTCGA CGCGATCGAA 
CGCGCGGCGG CGACCGACCT GCGCAGCGTC AACGCCGAGA TCGAATGCCT GCTGCGCGAG
GCGCTGGCCC GGCGCGGGAT CAGGGTCGCC CCGGCCGAGA AGCGCCCGCG CGGGCGGCCG
GCGGTGGAAC GGGATTAG
 
Protein sequence
MPARKAYPLR IDQPLFDAIE RAAATDLRSV NAEIECLLRE ALARRGIRVA PAEKRPRGRP 
AVERD