Gene Swit_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2122 
Symbol 
ID5198136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2385072 
End bp2385401 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content67% 
IMG OID640581667 
Productsmall multidrug resistance protein 
Protein accessionYP_001262619 
Protein GI148555037 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0613848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC GCATGGCTTG GATATGGTTG ATCGTCGGTG GTTGCTTCGA AGTGGGCTTC 
ACCACCTGCC TGCGCTTCGT CGACGGGTTC CGCAACATTC CCTGGACGCT GGGCTTCCTC
GCCTCGGTGA CGTTGTCGAT GGGCCTGCTC GAGGTCGCGA GCCGGTCGAT CCCGATGGGC
ACCGCCTATG CCGTCTGGGG CGGGATCGGC GCGATCGGGA CGGTGATCGT CGGCATGGCG
TGGTTCGGCG AGCCGGCGAC GCCGCTGCGC ATCGTCCTGA TCTTCGCGAT CGTCGCCTGC
ATCGCCGGGC TCAAGCTGAC CGCGCACTGA
 
Protein sequence
MARRMAWIWL IVGGCFEVGF TTCLRFVDGF RNIPWTLGFL ASVTLSMGLL EVASRSIPMG 
TAYAVWGGIG AIGTVIVGMA WFGEPATPLR IVLIFAIVAC IAGLKLTAH