| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2100 |
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| Symbol | |
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| ID | 5197321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2361301 |
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| End bp | 2362851 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581645 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001262597 |
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| Protein GI | 148555015 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.884338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.503326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA AGGCGCCCTA CGGCAATTAC GCGCATGCGG TACTGACCAA CAACGCGGCC
CGCACGCCCG ACGATATCGC GCTGGTCTAT CGCGGCGAGA GCTACAGCTT CGACGCGCTC
AACCGCCGGG TGAACCGCAC CGCCAACGCG CTGCGCGCGC TGGGCGTGGC GCCGGGGCAG
AAGGTCGCCT CGCTGCTCGG CGAGGCGCTG CACGTCGCCG AGACCTATTT CGCGGAAGCG
AAGATCGGCG CGGTGATCGC CGCCTTCAAT CCCTATTGGG CGCCCGACAT GGTGGTCGAG
ATGGCGCGCC GGTCGAAGAT CGACTGGCTG ACCATCGACG CGCCCAATGC GAAGTTCGCC
GAGACCGTCC GTGCCGAACT GCCCGAGGTC AGGCTGATCG CGGTCGGCAC CCGCATCGAG
GGCGCGGTGT CGCTCGACGA CGCGCTCGCC CAGGCATCGG ACGAGGAACC GCCGCTCGGC
GCCTTCTTCG ACGATCCGAT GGGCTTCTTC TACACCTCGG GCACCACCGG CACCTCCAAG
GCGGTGGTCC ACAGCCATTC GTCCTGCATC CAGATGAGCA CGGTGCTGTA CGAGGTCGAG
CGGTCGACGG ACTCGGTCTG GGGGTCGGGG CCGATCATCT GGGGGATCGG CTTCCCCTGC
ACGATCGGCG CGGCCCTCTA TGCGGGGATG AAGGTCGCGC TCGAGGATGA CCTCGGCCCG
GCGCGGCTGC TCGACGCGGT CCAGCGCGAG CGCATCTCAC ACATCACGAT GATCCCCAGC
CAATGGGCCG ACATATTGTC GAACCACCCG CACCAGGATT TCGACCTGTC GTCGCTCAAG
GTGATCCTGC TCGGCGGCGA GCCGATCTCG CCCAACATCT TCTCGCGGCT GATGGAGCGG
CTGCCCGGCC TGTCGCTCTA CAGCTTCTAC GGCCAGTCCG AGGGCCCCTA TAACTGCGTC
AACACGATCA CCGAGGCGCA TCTGGCGGCG ACCTCTGGCC GGGCGCGGGT GGGGCAGGCG
GTGCGGACCA TCGGCGCCAA CGGCGAACGC GTCGTCGGCG TGCCGGGCGA GATCGTCATG
ACCGGCCCCC ACCTGTTCCA GGGCTATGAC GGCCAGCCCG ACAAGACCGC CGAGGTGCTC
AAGGGCGGCT GGTTCCACAC CGGCGACCTT GGCCTGATGG ACGAGAGCGG GCGGCTGACC
GTGCTCGGCC GCAAGGAGGA CGCGATCAGC CGGGGCGGCC ATTATCTGCG GCCGATCCAG
ATCGAGGACG TCGCCGGCAC GATCGAGGGC GTGGCCGAGG CCGGCGTCGC GGGCAGCCCG
GCGGGCGCGC CCGAGCAGAA GATCATCCTC GCCGTCTCGC CCCAGCCGGG CGCGACGCTC
GACGAGGCCG GGCTGCACGC GCGGCTCCAG GCGCTGCTGC CGGCCGAGGC GATGCCCGAC
CTGATCGTCG TCGCCGACAG CCTGCCGCAC GGCAACGACG CCTCGGGCGG GCGCGGCAAG
CTGCTGCGGC GCGAGATCCG CGCGCTCTAC GAAGACCGGC TGGGCGGATG A
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| Protein sequence | MSGKAPYGNY AHAVLTNNAA RTPDDIALVY RGESYSFDAL NRRVNRTANA LRALGVAPGQ
KVASLLGEAL HVAETYFAEA KIGAVIAAFN PYWAPDMVVE MARRSKIDWL TIDAPNAKFA
ETVRAELPEV RLIAVGTRIE GAVSLDDALA QASDEEPPLG AFFDDPMGFF YTSGTTGTSK
AVVHSHSSCI QMSTVLYEVE RSTDSVWGSG PIIWGIGFPC TIGAALYAGM KVALEDDLGP
ARLLDAVQRE RISHITMIPS QWADILSNHP HQDFDLSSLK VILLGGEPIS PNIFSRLMER
LPGLSLYSFY GQSEGPYNCV NTITEAHLAA TSGRARVGQA VRTIGANGER VVGVPGEIVM
TGPHLFQGYD GQPDKTAEVL KGGWFHTGDL GLMDESGRLT VLGRKEDAIS RGGHYLRPIQ
IEDVAGTIEG VAEAGVAGSP AGAPEQKIIL AVSPQPGATL DEAGLHARLQ ALLPAEAMPD
LIVVADSLPH GNDASGGRGK LLRREIRALY EDRLGG
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