Gene Swit_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2094 
Symbol 
ID5198476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2355548 
End bp2356519 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content72% 
IMG OID640581639 
Productalpha/beta hydrolase fold 
Protein accessionYP_001262591 
Protein GI148555009 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.672457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA CAGCAGCGGG CGGGCCGGCC TGGTTCCGCG ACGCGCTCGC CTGCACGCCC 
GAACGCGGGA CGGTGCAGGC CGAAGGCGCG ACCATCGAGA CATTGGCCTG GGGCGATCCG
GCGAAGCCCG GCCTGTTCCT GCTCCACGGC GGCGCGGCGC ATGCCGACTG GTGGAGCTTC
ATCGCGCCGA TGTTCGCCGA CCGCTACCGC GTCGTCGCCT TCTCCTGGTC GGGGATGGGC
AGGTCCGACT GGCGCGAGCT TTATTCGATC CACGGCTTCG CGCGCGAGGC TGTCGCGGTC
GCGCAGGCGA CGGGGCTGCT CGACGGGCCG GCGCCGCCGA TCTGGATGGC GCACAGCTTT
GGCGGCCACC CGTCGCTGGT CGCCGCCGTC GAGATGCCCG AGGCGCTGTC GGCGCTGATC
CTGATCGACA CGGGCGGCTT TCCCGCGCCG GGCGTGGTCG AGAATTTCGT CTATTCGACC
CGCGCCTCGC CGGTGTTCGC GACACGCGAG GAGGCGCTCG CCCGTTTCCG CTTCGTGCCG
CCCGACCGCG ACGCGCCCGC CTTCGTCCGC GACTATGTGG CGGAGCGGTC GATCGCCGAG
CAGGGCGGCG ACCGGCCCGG CTGGCGCTGG CGCTTCGACT TCTCGATGTG GAGCCGGCTC
GACCGCGAGC CGGACATGCT GGAGCTGCTG GCGACGGCCG ACGTGCCGAT CGCCTTCATC
CTGGGCGGCG AGACCCAGAT CATGGCCGAC GACGCCGCCG ACCGGATCCG CGAGCTCCGC
CCCCGCTTCA CCCCGATCGC GACGGTGCCC GACGCGGGCC ACCATGTCAT GATCGACCAT
CCGCTGGCCT TCGTCGCGGC GGTCAACGGG CTGCTGTCGG CCTGGCCGGA GAAGATGGCG
GTCGGCCCCG GGGCAAGCCC GCTCTCAGTC GCCGCGAGCG GGAAATATCC TGATCCGATC
GCCGCGAAAT GA
 
Protein sequence
MTSTAAGGPA WFRDALACTP ERGTVQAEGA TIETLAWGDP AKPGLFLLHG GAAHADWWSF 
IAPMFADRYR VVAFSWSGMG RSDWRELYSI HGFAREAVAV AQATGLLDGP APPIWMAHSF
GGHPSLVAAV EMPEALSALI LIDTGGFPAP GVVENFVYST RASPVFATRE EALARFRFVP
PDRDAPAFVR DYVAERSIAE QGGDRPGWRW RFDFSMWSRL DREPDMLELL ATADVPIAFI
LGGETQIMAD DAADRIRELR PRFTPIATVP DAGHHVMIDH PLAFVAAVNG LLSAWPEKMA
VGPGASPLSV AASGKYPDPI AAK