| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2091 |
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| Symbol | |
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| ID | 5200087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2352013 |
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| End bp | 2353695 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581636 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001262588 |
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| Protein GI | 148555006 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.211257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCG ACCTTCTGAT CCGCAACGGC ACCGTCGTCG ACGGCACCGG CGCGCCGCGC
TTCGACGCCG ACGTCGCGGT GAAGGACGGC CGCATCGCCG CGATCGGCGC GGTCGCGGGC
GACGCCGCCC GCACCATCGA CGCGAAGGGC ATGATCGTCG CCCCCGGCTT CGTCGATCCG
CACACCCATT ATGACGCCCA GATGTGCTGG GACCCGCTGC TGACCCCGTC GAGCTGGCAC
GGCGTCACCA CGGTGGTGCT CGGCAATTGC GGGGTCGGCG TCGCGCCCTG CCGGCCCGGG
GACCGCGACA AGGCGACCTG GGACCTCGTG AACCTCGAGG CGATCCCCTA TGAGACGCTC
GCGCAGGGGC TGAGCTGGGA CTGGGAAAGC TTCCCCGACT ATATGGACGC CGCCGAGCGG
CGCGGCTGCG GGCTCAACCT CGCCTTCCTC GCCCCGCTCG CGCCGTTCCG CCGCTATGTG
CTGGGCGACG AAGCGATGGA GCGCCCGGCG ACGGCGGAGG AGACGACGCG CATCCGCGCG
CTGCTGCGCG AGGCGATGGC GGCCGGCGCG GTCGGCTTCT CCTCGACCCA GGCCCCGTCG
CACATCGGCT ATCAGGGCAA GCCGCTCGCC AGCGTGCCGG CCAGCGCCGA CGAGCTGGTC
GCCTATGCCG CCGAACTGGG CGCGATCGGG CGCGGCGCGA TCGAGATGGC GATCGGATCG
GTGGCGCCGT GGATGAAGCC CGCCGACTAT GAGCTGCTCG ACCGCATGCT GGAGGCCAGC
CGCGCGCCGC TGACCTTCCT CGCGCTGATG AAGTTCCTCG ACAAGCCCGA GGCGCATCTC
CGCGCGATGG AGCAGGTCGC GCCGCTGGTC GCGCGCGGCG CGCGGCCGCA GATGCATTCG
ACCAACCTGG TCAGCGACCT CAACCTGCGC GATCCGTTCA TGCTGTCGTC CTTCGCGTCG
CTGCGCGGCG TGTTCAACCA GCCGCGCGAG GTGCAGGCGG CGATCTACCG CGATCCCGCC
TTCCGCCGGG CGTTCCGCGA CGAGATCGCC GAACAGGCCG CCGCCTTCCA CGGCGACTGG
TCGATGGTCT GGGTGATCGC GACCGGCCGG GCCGATCTCG AACGGCTGAT CGGCCGCACC
CTGGTCGAGA TCGGCGCAGA GCGCGGGCAG GACCCGCTCG ACGCCTTCTT CGACCTCGCC
CTGGAAGACG ATCTCGCGAC CGCGTTCACC GCCGTCCGCT TCGGCGTGCC GGAGGAATTC
CTCGGCGATC CCCGCACCCT GATCGGCCTG TCCGACGGCG GCGCGCATGT CGGCATATTG
TGCAACGCCG GCTACACGAC CGAGATGCTC GGCGACCTCG TCCGCCGGCG CGGCCTGCTC
GACCTGGAGA CGGCGGTGAT GCGGCTGACC TCGGACCCGG CCGACGTCTT CGGCCTGTCC
GACCGCGGCC GGCTGAAGCC CGGCCTCGCG GCCGACATCG TCGTCTTCGA CCCCGCGACG
GTGGGATCGG ACAGCGCCCG GCCGGTGCCG CGCGACGACC TGCCCGGCGG CGCCCGCCGC
CTCGTCGTCG AGGCCGAGGG CATCCGCCAC GTCATCGTCA ACGGCGCGAT CCTGTTCGAG
GACGGCCGCC ACAGCGGCGC CTATCCCGGC CGGGTGCTGC GCCCCGGCCG CGCCAGCGCG
TGA
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| Protein sequence | MSFDLLIRNG TVVDGTGAPR FDADVAVKDG RIAAIGAVAG DAARTIDAKG MIVAPGFVDP
HTHYDAQMCW DPLLTPSSWH GVTTVVLGNC GVGVAPCRPG DRDKATWDLV NLEAIPYETL
AQGLSWDWES FPDYMDAAER RGCGLNLAFL APLAPFRRYV LGDEAMERPA TAEETTRIRA
LLREAMAAGA VGFSSTQAPS HIGYQGKPLA SVPASADELV AYAAELGAIG RGAIEMAIGS
VAPWMKPADY ELLDRMLEAS RAPLTFLALM KFLDKPEAHL RAMEQVAPLV ARGARPQMHS
TNLVSDLNLR DPFMLSSFAS LRGVFNQPRE VQAAIYRDPA FRRAFRDEIA EQAAAFHGDW
SMVWVIATGR ADLERLIGRT LVEIGAERGQ DPLDAFFDLA LEDDLATAFT AVRFGVPEEF
LGDPRTLIGL SDGGAHVGIL CNAGYTTEML GDLVRRRGLL DLETAVMRLT SDPADVFGLS
DRGRLKPGLA ADIVVFDPAT VGSDSARPVP RDDLPGGARR LVVEAEGIRH VIVNGAILFE
DGRHSGAYPG RVLRPGRASA
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