Gene Swit_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2052 
Symbol 
ID5199757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2303638 
End bp2304156 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID640581596 
Producthypothetical protein 
Protein accessionYP_001262549 
Protein GI148554967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.602887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT ATCCGGAAAG CGAAGTGCGC GCGGCGTGGG AGCATGTGCT CGCCGCGCGC 
GAGAAGATCG GGCGAGGCGA GGCGGACTGG GGCGACCTCG CCGAGCATTT CACCGAAGAC
GCCGTCTATA TCGACGCTGT CTGGGGCCGC TATGTCGGCC GCGAGGCGAT CAGGACCTTC
ATGCACGATT GCATGGTCGG CTTCGAGGAT TGGCGCTTCC CGACGCTGTG GACGCTGGTG
AAGGACAACC TGGTCGTCTG CGCCTTCTGG TCGCGCGTGC CGGGCCTGAA ACCGAACGGC
GACCATGCCG ATTGCCTGTG CTTCAGTGTC GCGATCTACG CGGGCGACGG GCTGTTCTGC
TACGAAACCG ACGTCTTCAA CATGGCCGAG CTCGGCGTGC TGGTCGAGGA GGTGGGCTGG
ACACCGCCCG CCAACAGCTC CCCCGTGCCC CAGAAGCCCG ACCGCAACCA GCTTCCGCCC
GACCGGCCGG GAATCGGCCA TTGGGGCCTG GCCGTCTGA
 
Protein sequence
MKVYPESEVR AAWEHVLAAR EKIGRGEADW GDLAEHFTED AVYIDAVWGR YVGREAIRTF 
MHDCMVGFED WRFPTLWTLV KDNLVVCAFW SRVPGLKPNG DHADCLCFSV AIYAGDGLFC
YETDVFNMAE LGVLVEEVGW TPPANSSPVP QKPDRNQLPP DRPGIGHWGL AV