| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2042 |
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| Symbol | |
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| ID | 5200879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2291771 |
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| End bp | 2292838 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640581586 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001262539 |
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| Protein GI | 148554957 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.595778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGGC ATAAGCATGT CGTACCGGTG TGCAATGCAA CTGCGCCGAC CGGTATGATC
GTCACCATGC TGGATTGCCT GTCCCGCATT TCGGGCGAGC CCGATCGCCT GCTCGCGGAG
GTGGGTGTCT CGCACAGCTT CGCGGCGTTC AAGGCGGGCC AGGTGCGCGA GATCGGGCTG
GACGCCTTCA TCGCGACAAA CCGGGCCTGC AACGCGCGCT TCCGCGACTA TCTCCACCAG
TCGCAGGGGC CGCAGATGAC CGAGGAGCAG TTCTCGCTGC TGTGCCGCTG CCTGATCGCC
TGCGCCGACC TGCGCGAGGT GCTGACGACC ACGTCGAGCT TCTTCGCGAT GTTCAACGGC
ACGCTCGGCG CCTTTCGCCC GGAGTTCGGC GATCGGCATG TCACGCTTTT CATCGAGCCC
CGCCGGCGCG GCCCTACCGA TCCTTCCTTC CTGATCGACG CCTTCGGAAT GGCGGTGCTC
CAGCTGTTGT TCGGCTGGCT GATCGGGCGG TCGCTGGCGT TGGAGCGCGT CGATTTCTCC
TATCCCGCCA GCGTGCGCAC GGATTTCGGC CTTGGCCTGT TCAGCTGCCC GGTGCGGTTC
GACCGGCCGA GCAACATCAT GCTGTTCGAT GCCGTCTATC TCTCGGCGCC GGTGGTGCGC
ACCAGCAGCG ACATGCGCAC GCTGCTGGAG ACCTTTCCCT ACGACATGAT GCTCGGGCGC
GATCGCGGCC GCTCGCTCGC CGATCAGGTC TATGCGCTCA TGATGAACGC GCATTCGGCG
GAGCGGCAAC TGCCCGGTGC CGAACGGGTG GCGCGGGACT TCGGCGTGTC GAGCTGGACG
CTGCGGCGGC GGCTGGCCGA GGAGGGGACC GGCTTCTCGC GCATCCGGCA GCGGTGCCAG
CTCAACATCA CCACCGATTT CCTGCGCCGG CCGGACCTGA CGATCGATCG CATCGCCGAG
ATCGCCAATT TCAGCGACGC CAACGCCTTT CGCCGCGCCT TCCAGCAATG GACAGGCAAG
TCCCCCACCG CCTTCCGCCG CGAGCTGGCC GCCGGGCGCA TCGGCTGA
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| Protein sequence | MSRHKHVVPV CNATAPTGMI VTMLDCLSRI SGEPDRLLAE VGVSHSFAAF KAGQVREIGL
DAFIATNRAC NARFRDYLHQ SQGPQMTEEQ FSLLCRCLIA CADLREVLTT TSSFFAMFNG
TLGAFRPEFG DRHVTLFIEP RRRGPTDPSF LIDAFGMAVL QLLFGWLIGR SLALERVDFS
YPASVRTDFG LGLFSCPVRF DRPSNIMLFD AVYLSAPVVR TSSDMRTLLE TFPYDMMLGR
DRGRSLADQV YALMMNAHSA ERQLPGAERV ARDFGVSSWT LRRRLAEEGT GFSRIRQRCQ
LNITTDFLRR PDLTIDRIAE IANFSDANAF RRAFQQWTGK SPTAFRRELA AGRIG
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