| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2028 |
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| Symbol | |
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| ID | 5200050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2274238 |
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| End bp | 2274993 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581572 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262525 |
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| Protein GI | 148554943 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGC TGAAAGGGCG CAATGCGATC GTGCTGGGCG CGTCCGCCGA AGGCGGAAGC
GGCTGGGCGA TCGCCGAACG GCTGGCGGGG GAGGGCGCGC GCGTCGTCGT CTCGGCGCGA
CAGCGTGAGG GTCTGGAGAA ACTGGCCGAC CGGATCGGCG GCATCGCCAT CGTCGCCGAC
GCCGCCCGGC TGGAGAGCGT CGCCGCGCTG ATGAAGGACG CCGCCGACCG GCTGGGCGCC
ATAGACATCG CTATCAATTC GGCCGCCGTC GCGCCGACCG GCCTGATCGC GGACGCGCCC
GACGAGGCCA TCCGCAAGGC GCTCGACGTC AACTATATCG GCAACGTCCA TTTCATCCGC
GGCGCGGCGG CGGTCATGAA CGACGGCGGG GCGATCGTCC TGGTCTCCTC GTCGAGCGCC
AACCAGCCGC TGCTGCCGAT GTTCCCCTAT GCCTGCGCCA AGGCGGCGGC CGACTGCCTC
GTCCGCTATG CGGCGCTCGA ATATGGTCCG CGCGGCATCC GGGTGAACTC GATCCTGCCC
GGCCCGATCA AGACGGGCAT GGCGGCCCAT ATCTACGCCG TGCCGGGCGC GGAGGAGCGC
CGCGCGCGGG AGATCCCGCT GGGCCGTGTC GCGCTGCCGG AGGATATCGC CGACGCGGTG
ATGGCGTTCG TCCATTCGCC CTATCTGACC GGCCACAACC TGCCGGTCAG CGGCGGCATG
CACCTGACGA GACCCGCCCG CCGCGACGAC GGCTGA
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| Protein sequence | MSGLKGRNAI VLGASAEGGS GWAIAERLAG EGARVVVSAR QREGLEKLAD RIGGIAIVAD
AARLESVAAL MKDAADRLGA IDIAINSAAV APTGLIADAP DEAIRKALDV NYIGNVHFIR
GAAAVMNDGG AIVLVSSSSA NQPLLPMFPY ACAKAAADCL VRYAALEYGP RGIRVNSILP
GPIKTGMAAH IYAVPGAEER RAREIPLGRV ALPEDIADAV MAFVHSPYLT GHNLPVSGGM
HLTRPARRDD G
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