| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2002 |
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| Symbol | |
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| ID | 5198750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2242523 |
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| End bp | 2243545 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581547 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001262500 |
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| Protein GI | 148554918 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.200285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG TCCTCTACGA ATATTCCGGG CCGCTGTTCG ACAGCGAACA GTCCGCCCGG
TTCGTGGCAT CGGTGGGACG CGATTATTAC GCCGCCGACT GTCTCGTCAG GCCCGAGCAG
GAGGATTTCC TCCTGCGCAA CACGCGAAGC TGGGCCGGCC AGCTTCCAAT CTCCGAGCAT
AGCTGCGTGG GCGCCCGGAC GGTCGTGCAA CGATCGTCCC GCCAGGTGCG CGACAGCAGC
GCCGACATCT ACCTGCTCTG GATCCCCGTG CGGGGTTCGG TCACCATCTC GCAGGGCGGG
CGTTCGGCGG TGATAGGGCG CGGCAATCTC GCTTTATCCT CGTCGCGCGA ACCACTGTGC
ATCCTGACCG AGCCCGACGA CCGGCAGGAG CATCTGTCCT ACCAGGTTTC CCTCCCCGCC
AGGATCATCG AGGAAGCCCT TCCCGACCCG CGACGGCTTT GCGCGGTCGG CTATTCATCG
CAGCTCGGCG GCGCCCGGAT CGCCCGCGAG CTGTTCCTGT CGCTCCACAA TGAAGGCGAC
CGGATCGACG GTCCGTCCTC GGCCGCGCTG GCGCAGTCGG CGCTGGAGGC CCTGTTCCGG
ACCCTCGCGC CCGATCGCTG CGACGCGGCG CAGCCGGCCG GCGCGCGCGC GATGAAGCTG
CAGCGCCTGC TGGACTATAT CGCGCTCAAC CACTCGGACC CCGAGCTCAC CACCGAGAAG
GCGGCGGCGG CCTGCGAGAT CTCGACACGC TATCTCCACT ATCTGCTCAA GGCGCGGGGC
CTGCGCTTCC ATGACCATCT GTGGGACGCG CGGCTGGACA GCGCCCATCG CCAGCTCGCC
GATCCGGCCC TGGCCCGCCG GACGATCGCC GAGATCGCCT ATACCGCGGG CTTCAAGAGC
ACGGCCCATT TCAGCCGCTC CTTCCGCCGC CGCTTCCAGC AATCCCCGCG CGACGTGCGG
AACCGGGCCG GGCAGGAAGG CGATCCCATG GTCAGCTCGG AAACAGGCCT CCATCGACAT
TGA
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| Protein sequence | MTQVLYEYSG PLFDSEQSAR FVASVGRDYY AADCLVRPEQ EDFLLRNTRS WAGQLPISEH
SCVGARTVVQ RSSRQVRDSS ADIYLLWIPV RGSVTISQGG RSAVIGRGNL ALSSSREPLC
ILTEPDDRQE HLSYQVSLPA RIIEEALPDP RRLCAVGYSS QLGGARIARE LFLSLHNEGD
RIDGPSSAAL AQSALEALFR TLAPDRCDAA QPAGARAMKL QRLLDYIALN HSDPELTTEK
AAAACEISTR YLHYLLKARG LRFHDHLWDA RLDSAHRQLA DPALARRTIA EIAYTAGFKS
TAHFSRSFRR RFQQSPRDVR NRAGQEGDPM VSSETGLHRH
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