Gene Swit_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1991 
Symbol 
ID5199670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2231323 
End bp2232117 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID640581536 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001262489 
Protein GI148554907 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.19767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAG ATTATGAGCA GCTGAAATTC AGCCGCCGCG GCCTGGTGCT GACGGTGACG 
ATGGACAATC CGCCGGTCAA CGGCGTCGGC CACAAGCTGC ATGACGAGCT TGCTCGCGTC
TTCCACGACA TCCGGCGCGA CGACGGCTGC AATGTCGTCG TGCTGACGGG GGAGGGGCGC
TGCTTCTCCG CCGGCGGCGA TCTCAACCAG ATGCTCGGCA ATCTGGAGGA CGGCAAGCAC
ATCCTGCGCG AGATGGGCGA CGCGCCGGAG ATCGCCAAAT CGCTGCTCGC GCTCGAGAAG
CCGACGATCG CCCATGTCAA CGGCCACGCC ATGGGACTGG GGGCGAGCCT CGCCCTGCTG
TGCGATGTCG TCTTCGCCAA CGAGAACGCC AGGATCGCCG ATCCGCATGT CCTGGTCGGC
CTGTCGGCCG GGGACGGCGG CGCGCTGATC TGGCCGCACC TGATCGGCTA TGCGCGGGCG
CGGCATCACC TGTTCACCGG GGAAGCGCTG ACCGGGCGGG ACGCCGCCGA GATCGGGCTG
ATCCACAAGG CGCTGCCGGA AGCCGAGCTG GCTCCGGCCG TCGCCGCCTA TGCGGACAAG
CTGGCGGCGC TGCCCTTCCA GGCGCTCAGC GCGACCAAGG TTTCGATCAA CATGGCGCTC
TGTCGCCAGG CGAACGCCGA TGTCGACAGC CATGTCCGCC TCGAAACGCG GGCGATGATG
TCGAACGACC ATCGGGAAGC GCTGCTCGCG ATGATCGAGA AGCGCGAGCC CCGCTTCGAT
CATGGCCGCG GCTAG
 
Protein sequence
MYEDYEQLKF SRRGLVLTVT MDNPPVNGVG HKLHDELARV FHDIRRDDGC NVVVLTGEGR 
CFSAGGDLNQ MLGNLEDGKH ILREMGDAPE IAKSLLALEK PTIAHVNGHA MGLGASLALL
CDVVFANENA RIADPHVLVG LSAGDGGALI WPHLIGYARA RHHLFTGEAL TGRDAAEIGL
IHKALPEAEL APAVAAYADK LAALPFQALS ATKVSINMAL CRQANADVDS HVRLETRAMM
SNDHREALLA MIEKREPRFD HGRG