Gene Swit_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1989 
Symbol 
ID5196352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2229455 
End bp2230852 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content68% 
IMG OID640581534 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001262487 
Protein GI148554905 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACG CGCCGACCGC CGAAGTCGTG GCCGCGCTGC GCGCCGATCT CCTCTCGGCG 
GTGGGGACGG CGGGGCTGCT CGAACCGGAG GATTTCGAGA CCCGTTCCTG CGATCCGTTC
CGGCCCGTGC CGATCCTGTC GCCCTTCGTC GCCCGGCCCG CGAATGCGGA GGAGCTGTCG
GCGGTGGTGA AGGCCGCGAT CGCGCACGGC TTCCGCATCG TCACCCATGG CGGCCGCACG
GGGGTGGCCG GCGGCGCCTT CACGCGGCCG GACAGCATCG TCGTCTCGCT CGAACGGATG
AACCGGATCG AGGAGATCAG CGACGTCGAC CAGATCGCCG TCGTCCAGGC GGGCGTGCCG
ATCCAGGCGC TGCACGAGGC GGTGGAGGCC AGGGGGCTGT TCTATCCCGT CGATCTCGGC
GCCAAGGGCA GCGCGACGAT GGGCGGCACG ATCGCCACCA ATGCGGGCGG CAACCATGTG
CTGCGCTGGG GCATGACGCG GGCCAACCTG CTGGGCATCG AGGGGGTGCT GGCGGACGGG
ACGATCGTCA GCTCGATGAA CCGGCTGCTG AAGAACAACA CCGGCTACGA CCTCAAGCAT
CTGTTCGCGG GCACCGAGGG GACGATCGGC ATCGTCACCC GCGCCGTGGT CAGGCTGGTG
CCGCTGCCGA CGACGCAGTC GGTGGCCTTC GTCGCGGTGG AGAGCATGGC GAAGGTCCTT
CGTCTGCTGA ACCTGGCGCG GGCGATGCCG GCGCTGAGCG CCTTCGAGGT GATGTGGCGC
GACTATTATG AGATGGTCGC GAACAGCGGC ACCGGACGCC GTCCGCTCGA ACCCGGCCAT
GACTATCATG TCCTGATCGA AAGCCTGGGT AACGATCCCG AGGCGGACGA GGGGGCGTTC
GAGCGCTTCG TCCAGCGGGC GAGCGACGAG GGGCTGATCG CCGACGGCGT GGTCGCCGCT
TCGGAAAGGC AGAGGCGCGA GCTGTGGCAT GTGCGCGAGG CCTCGGAAGT CTTCGTCAGC
GAGTTCGGCA CCTTCGTCTC CTTCGACGTC TCGGCCGAGC TGAACGCGAT CGAGCGGATG
GTCGAGGAAG CCTATGCGGC GCTGCGCGCG CGCTTCCCTG AGGTCCGCGG CGGCACCTTC
GGGCATCTGG GCGACAACAA CATCCACCTC GGCATCACCA TCGGCGAGGA TACGGTGGCG
CGGACCGCCG AGATCGAGGA GATCGTGTTC GACGTGCTCG CCCGCTATCA GGGCGCGCTC
ACCGCCGAAC ATGGCATCGG CACGCTGAAG CGCGACTTCC TGCGCAAATA TAAGAGCGAG
GGCGAGCTGG CGGCGATGCG GCGCCTGCGC GACGCCTTCG ATCCCGATCG CCGGCTCAAT
CCGGACGTGA TGCTATGA
 
Protein sequence
MADAPTAEVV AALRADLLSA VGTAGLLEPE DFETRSCDPF RPVPILSPFV ARPANAEELS 
AVVKAAIAHG FRIVTHGGRT GVAGGAFTRP DSIVVSLERM NRIEEISDVD QIAVVQAGVP
IQALHEAVEA RGLFYPVDLG AKGSATMGGT IATNAGGNHV LRWGMTRANL LGIEGVLADG
TIVSSMNRLL KNNTGYDLKH LFAGTEGTIG IVTRAVVRLV PLPTTQSVAF VAVESMAKVL
RLLNLARAMP ALSAFEVMWR DYYEMVANSG TGRRPLEPGH DYHVLIESLG NDPEADEGAF
ERFVQRASDE GLIADGVVAA SERQRRELWH VREASEVFVS EFGTFVSFDV SAELNAIERM
VEEAYAALRA RFPEVRGGTF GHLGDNNIHL GITIGEDTVA RTAEIEEIVF DVLARYQGAL
TAEHGIGTLK RDFLRKYKSE GELAAMRRLR DAFDPDRRLN PDVML