| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1979 |
|---|
| Symbol | |
|---|
| ID | 5199613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2216489 |
|---|
| End bp | 2217988 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640581524 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001262477 |
|---|
| Protein GI | 148554895 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGC AGCTTCACGA GAATGACCAG GGCTTCACCA TCGCCGAACC GGAGCGGCTG
TTCATCGGCG GCGAGTGGCG CGCGCCGGCC GACGGCACCT TTCTCGACGT GGTCTCGCCT
GCGACCGGCG CCGTCGGCGC GCGGGTGGCG GCCGGCGGGC CCAAGGACAT CGAGGCGGCG
GTGCGCGCGG CGCGCGACGC CTTCGACAAC GGGCCCTGGC CGCGCATGCC GATCGCCGAG
CGGGCGGCGA TCGTGCGGAG GATCGGTGCG CTGCTGCGCG AGCGCCTGAC CGAAACCACC
TGGGCGACCA CGCTGGAAAT GGGGGCGCCG CTTCCCATGG CGCGCGCCGT GGCGGAGCGC
GCCGCCGCGC TGTTCGACGA ATATGCCGAC ATCGGCGAGG CCTATCTGAT CGAGGATGTG
CGGGCCCGCG CCAACGGCGA ACATGCGGTC GTCGTGAGCG AGCCGGTCGG CGTCGTCGCC
GCCATCGTGC CGTGGAACGG GCCCAGCCTG CTGGCGGCCC TCAAGGTCGC GCCGGCGCTG
GTCGCGGGGT GCGCCGTGGT GCTGAAGCCG GCGCCGGAAA CGCCGCTCGA CGCCTATATC
CTGGCCGAGT GCATCGAGGC GGCCGGGGTG CCGGCCGGCG TGTTCAACCT GGTGCCGGCC
GATCGCGAGG CGAGCGACCA CCTGATCCGC CATCACGACG TCGACAAGAT CAGCTTCACC
GGCAGCACCA TGGTCGGCAA GCACATCCTG CGCACCACCG CCGACCGGGT GGCGCGGGTG
AGCCTCGAAC TGGGCGGCAA GTCGGCCGCG ATCGTTCTCG ACGATGCCGA TCCGGAACTG
GTCGTCAGCC GCATGGCCAC CGAGGTGACG ATGAACACGG GGCAGATCTG CGCCGCGCTG
ATGCGCGTCA TCGTGCCGCG CGCGCAGGCG AAGATGTATG GCGAGATGCT GGCGGACGCG
GTCGCGAAGA TCCGCGTCGG CAACCCGTTC GAACAGGGGA CGCAGGTCGG CCCGCTGGCG
ATGAAGCGCC AGCTCGAACG GGTGCAGGGC TATATCGAGA AGGGCCGCGA GGAAGGCGCG
ACGCTGATGT GCGGCGGCGG TCGTCCGTCC GATCTCGGCG ACGGCTTCTA CATCCAGCCG
ACCGTGTTCG CGAACGTCGA CCACCGCATG ACGATCGCGC GGGAAGAGAT TTTCGGTCCG
GTCGCCAGCG TGATCGCGCA TGACGGGCCG GATGACGCCG TCCGGATCGC CAACGACAGC
GACTATGGCC TGCACGGCGG CGTCTTCACC CGCGATGTCG ACACGGCCTA TGCCGTCGCC
CGCCGGATGC GCACCGGCAA TGTCGGGCAC AATATCCGGA CGATCGACTG GCAGATGCCG
TTCGGCGGCT TCAAGCAGTC CGGGCTGAGC CGCGAGGGCG GGGTCGAAGG GTTCCGCAAC
TTCCTCGAGA TCAAGACGGT GTACGTCGCC ACCCCGCCCT CGACGCTCGC GAAGGCCTGA
|
|---|
| Protein sequence | MATQLHENDQ GFTIAEPERL FIGGEWRAPA DGTFLDVVSP ATGAVGARVA AGGPKDIEAA
VRAARDAFDN GPWPRMPIAE RAAIVRRIGA LLRERLTETT WATTLEMGAP LPMARAVAER
AAALFDEYAD IGEAYLIEDV RARANGEHAV VVSEPVGVVA AIVPWNGPSL LAALKVAPAL
VAGCAVVLKP APETPLDAYI LAECIEAAGV PAGVFNLVPA DREASDHLIR HHDVDKISFT
GSTMVGKHIL RTTADRVARV SLELGGKSAA IVLDDADPEL VVSRMATEVT MNTGQICAAL
MRVIVPRAQA KMYGEMLADA VAKIRVGNPF EQGTQVGPLA MKRQLERVQG YIEKGREEGA
TLMCGGGRPS DLGDGFYIQP TVFANVDHRM TIAREEIFGP VASVIAHDGP DDAVRIANDS
DYGLHGGVFT RDVDTAYAVA RRMRTGNVGH NIRTIDWQMP FGGFKQSGLS REGGVEGFRN
FLEIKTVYVA TPPSTLAKA
|
|---|
| |