Gene Swit_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1978 
Symbol 
ID5199612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2216014 
End bp2216484 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID640581523 
Producthypothetical protein 
Protein accessionYP_001262476 
Protein GI148554894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.335296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CGCTCGAACA ACGCATCCAG CGGCTCGAGG ATATCGAGGA AATCCGCCAG 
TTGCGGATGC GCTATCACAT CAACACCAAC GATGGTCATT TCGACCAGAT GTGGAAGCTG
TTCGCCGAGG ACGCCTATGT CGACTTCGGC TATATCTCCC GCGCCAGGGG GCATGAGGAG
ATCAACGCGC TGTTCCTGCG CATCCCGCGC AACCTGCCGC TGGTGAAGCA GTTCATCCAC
AATCATCTCG TCGAGGTGAA CGGGGACGAG GCGACCGGAG TCTCCTATCT CGACGCCCGC
TATGCGCAGG CGGGCGACAG CGTGATGGTC GCCGCCCGTT TCGACGAGAT CTACGTGCGC
ACGCCCGATG GATGGCGGAT CAGGCAGATG CTGCTCGAAC TCTATTTCTC GGTGCCGATC
ACGGTCGGCT GGGCGGGCGA GCAGCTCAAC TATGTGAAGC CCTTCACGTG A
 
Protein sequence
MTTTLEQRIQ RLEDIEEIRQ LRMRYHINTN DGHFDQMWKL FAEDAYVDFG YISRARGHEE 
INALFLRIPR NLPLVKQFIH NHLVEVNGDE ATGVSYLDAR YAQAGDSVMV AARFDEIYVR
TPDGWRIRQM LLELYFSVPI TVGWAGEQLN YVKPFT