| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1977 |
|---|
| Symbol | |
|---|
| ID | 5199611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2215193 |
|---|
| End bp | 2215996 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640581522 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_001262475 |
|---|
| Protein GI | 148554893 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.793656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATG GGCAGATACT CTATTCGGCG GAAGACGGGA TCTGCCGCAT CTTGCTGAAC
CGGCCCGAGC ATCGCAACGC CCAGGGCCGG CAATTGCTGG AGGAACTGGA CGACGCGATG
CACCGCGCCG AGCGCGATCC CGATATCCGC GTGATCGTGC TGGGGGCGGT GGGCCCGCAT
TTCTCCGCCG GCCACGACCT CAAGGAATCG CAGCGCGACC GGCCGAACCT GACGGTCGAG
CAGCGCTGGG ATTGGGAGGA GGAGCATTAC CTCAACCATT GCCTGCGCAT CTGGGACCTG
CGGAAGCCGA CCATCGCCGA GGTGCGCGGG GCGTGCATCG CCGCCGGCTT CATGCTGGTC
AACATGTGCG ACCTGATCGT GGCGTCCGAG GATGCCTTCT TCTCCGATCC GGTGGCGCAC
AGCATCGGCG CGGCCTCGGT CGAGGTGCTG GTGCATCCAT GGGCGGTGGG CGCGCGCAAG
GCGAAGGAAC TGCTCTATAC CGGCGGCAAG CTGACCGCCG CGGATGCGAT GGCGGCCGGC
ATGGTCAATC GCGTGGTGCC GCCGGACCAG CTCGAGCAGG CCAGCATGGA ACTGGCCCGT
CGGATCGCGG AGGCGCCGCC CTTCGGCATC CGCCTCATGA AGAAATCGAT CAACCGCCTG
CTGGATATCC AGGGTTTCCG CAATTCTATC CAGGCGCATT TCGACACGCA TCAGCTCTCG
CACGAGTCCG ACACCTTCCG TTCGGCGACG CGAAAGGGGC TTTCGGGCAC CATCGGGCAC
GGCAAGGCCA AAGCCGCGGT CTGA
|
|---|
| Protein sequence | MAYGQILYSA EDGICRILLN RPEHRNAQGR QLLEELDDAM HRAERDPDIR VIVLGAVGPH
FSAGHDLKES QRDRPNLTVE QRWDWEEEHY LNHCLRIWDL RKPTIAEVRG ACIAAGFMLV
NMCDLIVASE DAFFSDPVAH SIGAASVEVL VHPWAVGARK AKELLYTGGK LTAADAMAAG
MVNRVVPPDQ LEQASMELAR RIAEAPPFGI RLMKKSINRL LDIQGFRNSI QAHFDTHQLS
HESDTFRSAT RKGLSGTIGH GKAKAAV
|
|---|
| |