Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1956 |
Symbol | |
ID | 5200231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2192288 |
End bp | 2193310 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640581501 |
Product | hypothetical protein |
Protein accession | YP_001262454 |
Protein GI | 148554872 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.893392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATG TTCATCAATC TCCGGGCCGG GCGCTGCTGG CCTCCCGGCT CGGCGACCGG ACCGCGGCGC TGCTCGCCAC GCTCGACCTC GACGAGGCGC TGGCCCATCG CGCGGACGGG GGGGCGGTGT CGCGCATCTG CTTCGCGGCG GCGCTCAACG CGCTGCTGTT CGACGACCTC CTCGCACGGG TGCCGACCGG CGCCGCCTTC GTCGCTGACC AGCGCGCCCG GGGCGAGCGC ATCCGCTTCG ATCATGGCGC GCTGCGCACG ATCCGCTTTC CGTTCGGAGG AACCGGCGCG CTCCCCGCCG GGCAGGACGC CTTCGCCCGC ATCCTCGGCC CGCTCGGCTA TGCCGTCGCG GGCACCTATC CGCTGCCCCG GCTGAAGATG ACGGGACGGG CCTGGGCGCA GCGCGACATG CCGGAGGGAT TGCCGCAATT CTTCGTCAGC GAGCTGCATG TCGAGCGCTT CGACGCCGAT TTCGCGGCGG CGGCGCAGCG CGTGTTCGGC GACAGCCGCG ACCCGCTCGC CCCCGCGACG GTCGCGGTGC TCGATCGCTT CGCGCGCGAC GGAGCGGTGT CGATGGAGGA GGCGGTCGCC GCGCTGCCGG CGGTGGCGGC GGCCTTCGAT CGCCAGCATG GCGACCCGGA CCTTGCCGAC TATGCGCTGC TGCTCGACCG GTCGGCCGAG GCGGCGTGGA TCGCGACCGA GGGCAATGCC TTCAACCACG CGACCAGCCG CGTGCCCGAC GTCGCGGCGG AGGCCGAACG GCAGCGGGCG CTCGGCCGGC CGATCAAGGA TCGGGTCGAG GTCTCGTCGA CCGGCCGGGT GCGCCAGACC GCCTTCCGCG CCGACCCGGT GGAACGGCGC TTCCGCGACG GCGCCGCGAC GGTCGTCCGC GCGGTGCCCG GCTCCTTCTA CGAGATCATC AGCCGCGACA GCGACCCGGC GACGGGCCGG CTCGATCTCG GCTTCGACAG CGGCAACGCC ACCGGCATCT TCGCTATGAC CCGCGCGGCG TGA
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Protein sequence | MLDVHQSPGR ALLASRLGDR TAALLATLDL DEALAHRADG GAVSRICFAA ALNALLFDDL LARVPTGAAF VADQRARGER IRFDHGALRT IRFPFGGTGA LPAGQDAFAR ILGPLGYAVA GTYPLPRLKM TGRAWAQRDM PEGLPQFFVS ELHVERFDAD FAAAAQRVFG DSRDPLAPAT VAVLDRFARD GAVSMEEAVA ALPAVAAAFD RQHGDPDLAD YALLLDRSAE AAWIATEGNA FNHATSRVPD VAAEAERQRA LGRPIKDRVE VSSTGRVRQT AFRADPVERR FRDGAATVVR AVPGSFYEII SRDSDPATGR LDLGFDSGNA TGIFAMTRAA
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