Gene Swit_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1956 
Symbol 
ID5200231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2192288 
End bp2193310 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content74% 
IMG OID640581501 
Producthypothetical protein 
Protein accessionYP_001262454 
Protein GI148554872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.893392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATG TTCATCAATC TCCGGGCCGG GCGCTGCTGG CCTCCCGGCT CGGCGACCGG 
ACCGCGGCGC TGCTCGCCAC GCTCGACCTC GACGAGGCGC TGGCCCATCG CGCGGACGGG
GGGGCGGTGT CGCGCATCTG CTTCGCGGCG GCGCTCAACG CGCTGCTGTT CGACGACCTC
CTCGCACGGG TGCCGACCGG CGCCGCCTTC GTCGCTGACC AGCGCGCCCG GGGCGAGCGC
ATCCGCTTCG ATCATGGCGC GCTGCGCACG ATCCGCTTTC CGTTCGGAGG AACCGGCGCG
CTCCCCGCCG GGCAGGACGC CTTCGCCCGC ATCCTCGGCC CGCTCGGCTA TGCCGTCGCG
GGCACCTATC CGCTGCCCCG GCTGAAGATG ACGGGACGGG CCTGGGCGCA GCGCGACATG
CCGGAGGGAT TGCCGCAATT CTTCGTCAGC GAGCTGCATG TCGAGCGCTT CGACGCCGAT
TTCGCGGCGG CGGCGCAGCG CGTGTTCGGC GACAGCCGCG ACCCGCTCGC CCCCGCGACG
GTCGCGGTGC TCGATCGCTT CGCGCGCGAC GGAGCGGTGT CGATGGAGGA GGCGGTCGCC
GCGCTGCCGG CGGTGGCGGC GGCCTTCGAT CGCCAGCATG GCGACCCGGA CCTTGCCGAC
TATGCGCTGC TGCTCGACCG GTCGGCCGAG GCGGCGTGGA TCGCGACCGA GGGCAATGCC
TTCAACCACG CGACCAGCCG CGTGCCCGAC GTCGCGGCGG AGGCCGAACG GCAGCGGGCG
CTCGGCCGGC CGATCAAGGA TCGGGTCGAG GTCTCGTCGA CCGGCCGGGT GCGCCAGACC
GCCTTCCGCG CCGACCCGGT GGAACGGCGC TTCCGCGACG GCGCCGCGAC GGTCGTCCGC
GCGGTGCCCG GCTCCTTCTA CGAGATCATC AGCCGCGACA GCGACCCGGC GACGGGCCGG
CTCGATCTCG GCTTCGACAG CGGCAACGCC ACCGGCATCT TCGCTATGAC CCGCGCGGCG
TGA
 
Protein sequence
MLDVHQSPGR ALLASRLGDR TAALLATLDL DEALAHRADG GAVSRICFAA ALNALLFDDL 
LARVPTGAAF VADQRARGER IRFDHGALRT IRFPFGGTGA LPAGQDAFAR ILGPLGYAVA
GTYPLPRLKM TGRAWAQRDM PEGLPQFFVS ELHVERFDAD FAAAAQRVFG DSRDPLAPAT
VAVLDRFARD GAVSMEEAVA ALPAVAAAFD RQHGDPDLAD YALLLDRSAE AAWIATEGNA
FNHATSRVPD VAAEAERQRA LGRPIKDRVE VSSTGRVRQT AFRADPVERR FRDGAATVVR
AVPGSFYEII SRDSDPATGR LDLGFDSGNA TGIFAMTRAA