| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1953 |
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| Symbol | |
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| ID | 5197184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2189221 |
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| End bp | 2190324 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640581498 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001262451 |
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| Protein GI | 148554869 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTTGCG TCGCGGCGAT GCTCGCGCTT GCCGCCTGTG GCGAAAAGCC GCAGGGCCCG
CCGCCCGCGC CCGAGGTGTC GGTGGTGAAG ATCGCCCCCG CGGCGGTGTC GATCGCCGAC
GAGCTGCCCG GCCGGGTCGT CGCCTTCCGC GTCGCCGAGA TTCGTCCGCA GGTGAGCGGG
ATCGTCCAGC GCCGCCTGTT CGAGCAGGGC AGCGAAGTGC GCGCCGGCCA GCCGCTGTTC
CAGATCGATC CGTCGCCGTT CCGCGCCGAC GCGGGCAGCG CCGCCGCGAG CGTGCGCCGC
GCCGAGGCGA CCCTCGCCCG CGCGAAGGTG CAGGAGGACC GGCTCGCCCC GCTGGTCAAG
AGCGACGCGA TCAGCGGCCA GGCCTATGAC GACGCCGTCG CCGCGCGCCG GCAGGCGGCC
GCCGACCTCG CCCAGACCCG CGCCGACCTC GAACGGCGCC GGGTCGACCT CGGCTTCGCG
ACGATCCGCT CGCCGATCAG CGGCCGGATC GACCAGGCCG TGCTGACCGA GGGCGCGCTC
GCCAATGCGG GCGACGCCAA TCCGCTCGCC ACCGTGCAGC AGATCGACCG CGTCTATGTC
GACGTGCGCC AGCCGGCGAC CCGGCTCGAT GCGCTGCGCG ACGCGGCGCG CGCCGGCGCC
GCCGACCAGG GCGCGCCGGT CGAGATCGTC TCGGGCACCG GCCGGGTCTA CCCGGTCAAG
GGCCGGCTGC TGTTCTCGGG CATCAGCGTC GATCCCGGCA CCGGCGAGGT GATTGCGCGG
GTCGAGGTGC CGAACGGCGA CCGGACGCTG CTGCCCGGCA TGTTCGTCCG CGCCCGGCTG
CCGCGCCTCG CCCTGCCGAG CGCGATCATG GTGCCGCTCC AGGCGGTCGC CCATGGCGGC
TCCGGCGACA CCACGGTCAA GATCGTCGAC GCGCAGAACA AGGTGCAGGA CCGCAAGGTC
GTGCTCGGCG ACGAGAAGGA CGGGCAGGTC ATCGTCCACG AAGGGCTGAA GCCCGGCGAC
CGGGTGCTGG TCGAGGGCCA GGACCGGGTG CAGTCGGGCG CGGTCGTCAA GCCGATGCCG
TGGCGCCGGG CCGCGGCGCG CTGA
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| Protein sequence | MLCVAAMLAL AACGEKPQGP PPAPEVSVVK IAPAAVSIAD ELPGRVVAFR VAEIRPQVSG
IVQRRLFEQG SEVRAGQPLF QIDPSPFRAD AGSAAASVRR AEATLARAKV QEDRLAPLVK
SDAISGQAYD DAVAARRQAA ADLAQTRADL ERRRVDLGFA TIRSPISGRI DQAVLTEGAL
ANAGDANPLA TVQQIDRVYV DVRQPATRLD ALRDAARAGA ADQGAPVEIV SGTGRVYPVK
GRLLFSGISV DPGTGEVIAR VEVPNGDRTL LPGMFVRARL PRLALPSAIM VPLQAVAHGG
SGDTTVKIVD AQNKVQDRKV VLGDEKDGQV IVHEGLKPGD RVLVEGQDRV QSGAVVKPMP
WRRAAAR
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