| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1949 |
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| Symbol | |
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| ID | 5199063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2183170 |
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| End bp | 2183844 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640581494 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001262447 |
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| Protein GI | 148554865 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAC GTGAACTGAT CGGAACGGCC CAGGTGCCGG GGGGCGAGCC GCTGCGGCTG
TTCCGGCGCG GCGACGATTT CATGATCGTG CTCGACCGCA ACGAGCTGAT GAGCAGCCGG
ATGAGCGGAT CGGAGGAGGC GCTGGCGCTG ATGACGATCG AGCGGCTCGG CGGCGGGGCG
GGCGCGCCGC ACCTGCTGAT CGGCGGCTAT GGCATGGGCT TCACCCTGCG CGCGGCGCTG
GGCGCGCTGC CGGCGACGGC GCGGATCACC GTGGCCGAGC TGGTGCCCGA GATCATCCAC
TGGGCGCGCG GGCCGATGGC CGAGCTGGCG GCCGGCTGCC TCGACGACAA GCGGGTGACG
ATCGTCGAGA GCGACGTCGC CGAGGTGATC CAGGCCGGCC CCCGCAGCTA TGACGCGATC
CTGCTCGACG TCGACAACGG CCCCGACGGC CTCGTCCGCG ACGCCAACGG ATGGCTCTAT
TCGGCGCGCG GCCTCGCGGC GGCGCGGGCG GCGCTGAAGC CGGGCGGGGT GCTCGCGGTC
TGGTCGGCGG CGCCCGACGC GGCCTTCGTC CGCCGCCTGC GCAGCGCCGG CTTCCGGGTC
GACGAGGTCG CCGTCCGCGC GCGCAGCAAC GGCAAGGGAC CGCGCCACGT CATCTGGTTC
GCGACGCCGG CCTGA
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| Protein sequence | MKARELIGTA QVPGGEPLRL FRRGDDFMIV LDRNELMSSR MSGSEEALAL MTIERLGGGA
GAPHLLIGGY GMGFTLRAAL GALPATARIT VAELVPEIIH WARGPMAELA AGCLDDKRVT
IVESDVAEVI QAGPRSYDAI LLDVDNGPDG LVRDANGWLY SARGLAAARA ALKPGGVLAV
WSAAPDAAFV RRLRSAGFRV DEVAVRARSN GKGPRHVIWF ATPA
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