| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1946 |
|---|
| Symbol | |
|---|
| ID | 5199060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2180386 |
|---|
| End bp | 2180880 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640581491 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262444 |
|---|
| Protein GI | 148554862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.733972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCA GTCTGGACCA GGAAAGCATC GACTATATCG CGATCAGGCG GTTGCAGGCC
GCCTATGCCG ACATGATCAC GCGCCGCGCC TGGGACGAGC TGCCGTCGAT CTTCTGCGAA
GGCGCCCGGA TCGTCGTCGA CCGGATGGAC GGAACCCCGC TCGACCTCGA CGGCCCGGCC
GGCCTCGCCG CCTTCGTGTC GAAGGCGATC GGCCATATGG ACTTCTTCGA GTTCGTCATC
CTCAACACCG TCATCGAGAT CGGCGACGAC GAAGCGCACG GCCGCATGTA CATGTGCGAG
ATCCGGCATG ACGCCAAGGC CGGGCAGACC ATGTCCTACG GCCTCTATCG CGACCATTAC
CGCAAGCAGG ACGGCCGCTG GAAATTCCGG GACCGCCGCT ACCGGGTGAT GGGGCGCACC
CAGACCACCG ACTATAATAT CTTCCCGATG GCGGCCGCCG ACTTCGCGAT CGGCGGGCAG
GAGGCGACGC GATGA
|
|---|
| Protein sequence | MSVSLDQESI DYIAIRRLQA AYADMITRRA WDELPSIFCE GARIVVDRMD GTPLDLDGPA
GLAAFVSKAI GHMDFFEFVI LNTVIEIGDD EAHGRMYMCE IRHDAKAGQT MSYGLYRDHY
RKQDGRWKFR DRRYRVMGRT QTTDYNIFPM AAADFAIGGQ EATR
|
|---|
| |