| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1937 |
|---|
| Symbol | |
|---|
| ID | 5196365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2170606 |
|---|
| End bp | 2171295 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640581482 |
|---|
| Product | uroporphyrinogen III synthase HEM4 |
|---|
| Protein accession | YP_001262435 |
|---|
| Protein GI | 148554853 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0356015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTC CGCCCCTGCT GATCCTCCGC CCCGAACCGG GCGCGAGCAT GACCGCCAAG
CGCGCGTTCG GCGAAGGCTG GCGCCCGGTC GTCTCGCCGA TCTTCCGGAT CGAGCCGATC
GCCTGGGGCG CGCCGCCCGC CGGCGATTAT GACGCGCTGT TCGTCACCAG CGCCAACGCC
GTGCGCCAGG CCGGCAAGGC GATCCGGCCC TATGCCGTCA TCCCGGCCTA TGCGGTCGGC
GACGCGACCG CCCGCGCGCT GAAGGCGGCG GGCTTCACCG ACATCCACAC CGGGCGCGGC
GACGCGGCGG CGATGCTGGA GACCGCCGCC GCGAACGGCG TCGCCCGCGC GCTGCACCTC
GCCGGCGAGG ATCATCGCGA CGCCGGGCTC GACGCGATCG CGATCGACCG GCGGATCGTC
TATCGCAGCG CGGCGATCGA ACGGTTCGGC GACAAGGCGC TGGCCGCGCT GCGCGAGGGC
GGCGGCGCGG TGCTGCTCCA TTCGGGCCGG GCCGCCGAGC ATTTCGCCCG GCTGTGCGAC
GGCGCGCGGA TTTCGCGCCG CCATGTCAGG ATCGCCGCCT TGGCCCCGGC GGTGCTCGAC
GCGGCCGGCT CCGGCTGGCG CGCCGGGATC GCCGCCGACA AGCCGGACGA CGCGGCGCTG
CTGGCGGCGG CGGCGCGGCT GTGTCAATAA
|
|---|
| Protein sequence | MSRPPLLILR PEPGASMTAK RAFGEGWRPV VSPIFRIEPI AWGAPPAGDY DALFVTSANA
VRQAGKAIRP YAVIPAYAVG DATARALKAA GFTDIHTGRG DAAAMLETAA ANGVARALHL
AGEDHRDAGL DAIAIDRRIV YRSAAIERFG DKALAALREG GGAVLLHSGR AAEHFARLCD
GARISRRHVR IAALAPAVLD AAGSGWRAGI AADKPDDAAL LAAAARLCQ
|
|---|
| |