| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1914 |
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| Symbol | |
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| ID | 5196282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2147412 |
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| End bp | 2149178 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581459 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001262412 |
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| Protein GI | 148554830 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTC CCCTGGAAGC CCTTCAGCAG ACCTTCGGCT ATGCGCATTT CCGGGGGCGG
CAGGCGGACG TGATCGACCG GGTGATGGCC GGGCTCAACA CGCTGGCGGT GATGCCGACC
GGCGCGGGCA AGTCGCTGAC CTACCAGATT CCGGCGCTGT GCCGGCCGGG CACCGGCCTG
GTGGTCTCGC CGCTGATCGC GCTGATGCAC GACCAGGTGC GCTCGGCCGA GGCCGCCGGC
ATCCGCGCCG CCGCGCTCAC CTCCGCCGAC GACAATCGCG ACGAGACGAT CGACCGGCTG
CGCTCGGGCG CGCTCGACCT GCTCTACGTC GCGCCGGAGC GCGTCTCGAC CGAGGGCTTC
CGCCGGCTGC TGAGCCAGGT GCCGCTGGCG CTGATCGCGA TCGACGAGGC GCATTGCGTG
TCCGAATGGG GGCACGACTT CCGCCCCGAC TATCGCCTGC TGCGGGGGCT GCTCGACACG
CGGCCCGACG TGCCGCGCCT GGCGCTGACC GCGACCGCCG ACCACCACAC GCGCGACGAC
ATATTGGCGC AGCTCGGCAT CGCCCCCGAC GGCCTGATCC TCGCCGGCTT CGACCGCGCC
AACCTGCGCT ACGGCATCAC CCCGCGCGAC GGCGTCGCCA GGCAGCTCGC CCGCTTCATC
GAGGAGAATC CGGGCGCGGG CATCGTCTAT GCCCCGACCC GCGACGCGAC CGAGCGGCTG
GCGGCGCAGC TCGCCGCGAA CGGCCGCGCC GCGCGCGCCT ATCATGCCGG GCTCGATCCC
GCCGTCCGCG CCGCCAACCA GAAGGCGTTC GTCGCGTCGG AGGACATGGT GATGGTGGCG
ACGGTCGCCT TCGGCATGGG CATCGACAAG CCCGACGTCC GCTTCGTCGC CCATGCCGGC
CTGCCCAAGT CGATCGAGGC CTATTATCAG GAGACCGGCC GCGCCGGCCG CGACGGCGAC
CCGGCCGCCA CCCAGCTGTT CTGGGGCGCC GAGGACTTCG CCCGCGCCCG CCGTCGGATC
GAGACCGACG TCGAGGAGAG CCGCCGGCCG GGCGAGCGCC AGCGGCTCAA CGCGATGGCG
ATGCTGGTCG AGGCGCCGGG CTGCCGCCGC GCGATCCTGC TGCGCCATTT CGGCGAGGAC
CCGCCGGCCC AGTGCGGCAA TTGCGACAAT TGCCTCAACC CGCCGACCGG GATCGACGCG
ACCGTCGTCG CGCAGAAGCT GCTCTCCGCG GCCTTCCGCA CCGACATGCG CTTCGGCGTC
ACCCATTTGT CCGAGGTGCT GGCGGGCAAG GAGACCGAGA AGATCCTGAT GCTCGGCCAC
AACCGGCTGT CGGTGTTCGG CATCGCCGAC GAGGCCGAGC AGAAGCTGAT CAAGCCGGTC
GCCCGCGCGC TGCTCGCCCG CGACGCGCTG CGCGCCGACG AATATGGCGG CCTGTCCTTC
GGCCCCGGCG CCCGTCCGAT CCTGAAGGGC GAGGAACAGG TGCCGCTGAT CCTGCCCCCC
GAGCGGGCGC GGCGGCGCAA GTCGCGCGAC GGCGCCGACT ATCCGCACGA TCCGCTGTTC
GACCGGCTGC GCGCGCTGCG CCGCGACCTG GCGCGCGAGC AGGGGGTGCC GCCCTATGTC
GTGTTCAACG ATTCGACCCT GCGCGAAATG GCCGCGCTCC GGCCCGAGAC GCTGGCTGGC
CTTGCGCAGA TTTCGGGCGT AGGGGCGAAG AAGCTGGAAA CCTATGGCGA GACCTTCCTC
GCCGCCATTC AGAGCCATGA CGGCTGA
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| Protein sequence | MPTPLEALQQ TFGYAHFRGR QADVIDRVMA GLNTLAVMPT GAGKSLTYQI PALCRPGTGL
VVSPLIALMH DQVRSAEAAG IRAAALTSAD DNRDETIDRL RSGALDLLYV APERVSTEGF
RRLLSQVPLA LIAIDEAHCV SEWGHDFRPD YRLLRGLLDT RPDVPRLALT ATADHHTRDD
ILAQLGIAPD GLILAGFDRA NLRYGITPRD GVARQLARFI EENPGAGIVY APTRDATERL
AAQLAANGRA ARAYHAGLDP AVRAANQKAF VASEDMVMVA TVAFGMGIDK PDVRFVAHAG
LPKSIEAYYQ ETGRAGRDGD PAATQLFWGA EDFARARRRI ETDVEESRRP GERQRLNAMA
MLVEAPGCRR AILLRHFGED PPAQCGNCDN CLNPPTGIDA TVVAQKLLSA AFRTDMRFGV
THLSEVLAGK ETEKILMLGH NRLSVFGIAD EAEQKLIKPV ARALLARDAL RADEYGGLSF
GPGARPILKG EEQVPLILPP ERARRRKSRD GADYPHDPLF DRLRALRRDL AREQGVPPYV
VFNDSTLREM AALRPETLAG LAQISGVGAK KLETYGETFL AAIQSHDG
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