Gene Swit_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1906 
Symbol 
ID5200979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2136443 
End bp2137222 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID640581451 
Productshort chain enoyl-CoA hydratase 
Protein accessionYP_001262404 
Protein GI148554822 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.34521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAC CGATACGCTA TGAGACGACC GGGCCGATCG CGACGATCAC GCTCGATCGG 
CCCGATGCGC TCAACGCGAT CACCGTCGCG ATGATCGAGG CGCTCGACGC CGCGCTGGCC
CAGGCGGCCG AGGACCGGGC CGTCCGCGTC CTGATCGTCA CCGGATCGGG CCGCGCCTTC
TGCGTCGGGG CGGACATCGG CCAGCTCGAC CAGTGGGAGA AGGATCCGGG ATTGCGCGAC
CGCTTCTACG CGCTGGCGCC GCGCTTCTTC CGCCGGCTCG AGGAATTCCC CAAGCCGGTC
ATCGCCGCGG TCAACGGCGT GGCGGCGGCC GGCGGGTTCG AGATATGCTG CTTCGCCGAT
ATCGTCATCG CGGCGGAGGA TGCGCGGATC GGCGATGCCC ACGCCAATTT CGTCGGCTTC
GGGCCGGTGT CGGCGGTCGT CGCGCCGACC GTCCTGCCGC GCAAGATCGC CGCCGAGCTG
CTCTATACCG GCGACATGAT GAGCCCGGCG CAACTCCACC TCTGGGGTTT CGTGAACCGG
GTCGTACCGG CGGCCGAGCT GATGGAGACC GCTCTCGCCA TGGCCGGGCG GATCGCCGCC
AAGCAGCCGC TCGCGATCCA GGCGGCGAAG AACCTCGCCC GCCGCGCCGG CCTCGTCGAT
CCGGGGCTGC TCGGCTCGCA CGCCTATGAG AGCGCCAAGG CGATCTTCGC GACCGAGGAT
TTCCAGGAAG GCCTGCGCGC CTTCGCCGAG AAGCGGGCGC CCGATTTCAA GGGACGATGA
 
Protein sequence
MAAPIRYETT GPIATITLDR PDALNAITVA MIEALDAALA QAAEDRAVRV LIVTGSGRAF 
CVGADIGQLD QWEKDPGLRD RFYALAPRFF RRLEEFPKPV IAAVNGVAAA GGFEICCFAD
IVIAAEDARI GDAHANFVGF GPVSAVVAPT VLPRKIAAEL LYTGDMMSPA QLHLWGFVNR
VVPAAELMET ALAMAGRIAA KQPLAIQAAK NLARRAGLVD PGLLGSHAYE SAKAIFATED
FQEGLRAFAE KRAPDFKGR