Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1906 |
Symbol | |
ID | 5200979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2136443 |
End bp | 2137222 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581451 |
Product | short chain enoyl-CoA hydratase |
Protein accession | YP_001262404 |
Protein GI | 148554822 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.34521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCAC CGATACGCTA TGAGACGACC GGGCCGATCG CGACGATCAC GCTCGATCGG CCCGATGCGC TCAACGCGAT CACCGTCGCG ATGATCGAGG CGCTCGACGC CGCGCTGGCC CAGGCGGCCG AGGACCGGGC CGTCCGCGTC CTGATCGTCA CCGGATCGGG CCGCGCCTTC TGCGTCGGGG CGGACATCGG CCAGCTCGAC CAGTGGGAGA AGGATCCGGG ATTGCGCGAC CGCTTCTACG CGCTGGCGCC GCGCTTCTTC CGCCGGCTCG AGGAATTCCC CAAGCCGGTC ATCGCCGCGG TCAACGGCGT GGCGGCGGCC GGCGGGTTCG AGATATGCTG CTTCGCCGAT ATCGTCATCG CGGCGGAGGA TGCGCGGATC GGCGATGCCC ACGCCAATTT CGTCGGCTTC GGGCCGGTGT CGGCGGTCGT CGCGCCGACC GTCCTGCCGC GCAAGATCGC CGCCGAGCTG CTCTATACCG GCGACATGAT GAGCCCGGCG CAACTCCACC TCTGGGGTTT CGTGAACCGG GTCGTACCGG CGGCCGAGCT GATGGAGACC GCTCTCGCCA TGGCCGGGCG GATCGCCGCC AAGCAGCCGC TCGCGATCCA GGCGGCGAAG AACCTCGCCC GCCGCGCCGG CCTCGTCGAT CCGGGGCTGC TCGGCTCGCA CGCCTATGAG AGCGCCAAGG CGATCTTCGC GACCGAGGAT TTCCAGGAAG GCCTGCGCGC CTTCGCCGAG AAGCGGGCGC CCGATTTCAA GGGACGATGA
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Protein sequence | MAAPIRYETT GPIATITLDR PDALNAITVA MIEALDAALA QAAEDRAVRV LIVTGSGRAF CVGADIGQLD QWEKDPGLRD RFYALAPRFF RRLEEFPKPV IAAVNGVAAA GGFEICCFAD IVIAAEDARI GDAHANFVGF GPVSAVVAPT VLPRKIAAEL LYTGDMMSPA QLHLWGFVNR VVPAAELMET ALAMAGRIAA KQPLAIQAAK NLARRAGLVD PGLLGSHAYE SAKAIFATED FQEGLRAFAE KRAPDFKGR
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