| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1903 |
|---|
| Symbol | |
|---|
| ID | 5197099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2133191 |
|---|
| End bp | 2133715 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640581448 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262401 |
|---|
| Protein GI | 148554819 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4405] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCG CGGCCGTCGC GCTGATGCTG GCGGCGGCCG CCCCGGCGGC GCCCGACCCC
GCCGCGGTCG ACGCCTTCCT CCGCCGCGCC GGCGCCGCGA CCGGCGCGCC GGTGCGGATC
GACATGACGC GCACGATGGG CCGCAACCAG GACATCTCGC GCAAGATCAC CGAACAGGTC
CTCGCCGGCG AGAAGCGCGC GACGCTCGCC CGGGAGGCCG AGTTCGTCGA GAAGGGCTGG
CCGCTGCCCC GGCCCGGGCA GATCGTCCTC GTCTACGACT TCGACGGCAA GCCCAGCTTC
CTCTACCGGG TGGTCGCGGC GCAGGTCCTG CCGCTCGGAT CGGTCGCCCC CTGGCACCTG
ATGACCGAGA GCCCGGCGCT GCGCGACCTG TCGGCGTGGC GCAAGGCGCA TCTCGGCCTG
TGGAAGGACG CCATCGCCGG GATGAGCCCC GACGAGGTCG AGCACATGCC GGTGGTCTGG
ACCCGCTTCG AACCGGTCTA TCCGGCGGCC AGCCCGCCCC GCTGA
|
|---|
| Protein sequence | MIGAAVALML AAAAPAAPDP AAVDAFLRRA GAATGAPVRI DMTRTMGRNQ DISRKITEQV
LAGEKRATLA REAEFVEKGW PLPRPGQIVL VYDFDGKPSF LYRVVAAQVL PLGSVAPWHL
MTESPALRDL SAWRKAHLGL WKDAIAGMSP DEVEHMPVVW TRFEPVYPAA SPPR
|
|---|
| |