| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1895 |
|---|
| Symbol | |
|---|
| ID | 5199019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2123174 |
|---|
| End bp | 2123806 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640581440 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262393 |
|---|
| Protein GI | 148554811 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.803061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGC GCCCGCAGCT TCCGGAAAGG CCGGCGATGG ACCCGATTTC CCGACGAGCC
CTGTTGCGGA CCGGCGCCGT CGGCGGCGGC GCGGCGGGAC TGGCGCTGCT CGGCGCGCCG
CTCGGGGCGG CGGAACCCGT GGCGGCCGCG ACGGCCGACG CGGGCCGCCA GCCCCTGCTC
GCGGCGCTGG TCGACACGAT CATCCCCGCC ACCGACACGC CGGGCGCAGC GGAGGCCGGG
GTCGCCGATT TCGTCGCGAT GATGGTCGAG CGCTGGATGC ATCCCGACGA GCGGGCGCGC
TTCCTCGCCG GGCTCGACAG CTTCGACGCG ACCGTCCGCC GCAGCCATGG CCAGCCCTTC
GCGGCGCTGC CGCCCGCGCG GCGGCTGGAG ATCCTCCAGG CGATGGCCGC CGCCGAGGAG
GGCACCGCCG CCGGCACCCC GCCGGCCGAG GGCCCGTTCC TCGCCCGCAT CCGCGCCCTC
GCCATCTACG GCTATTACAC GTCGGAAGCC GGCGCCTCGC AGGAGCTGGA GCTCAACCTC
GTCCCCGGCC ATTACGAGCC GTGCCACGAT CTCCAGCCCG GCGAGCGGGC GGTATCGCTG
GGCCGCAACA ACGCCGTGCT GCGGATGCCC TAG
|
|---|
| Protein sequence | MTRRPQLPER PAMDPISRRA LLRTGAVGGG AAGLALLGAP LGAAEPVAAA TADAGRQPLL
AALVDTIIPA TDTPGAAEAG VADFVAMMVE RWMHPDERAR FLAGLDSFDA TVRRSHGQPF
AALPPARRLE ILQAMAAAEE GTAAGTPPAE GPFLARIRAL AIYGYYTSEA GASQELELNL
VPGHYEPCHD LQPGERAVSL GRNNAVLRMP
|
|---|
| |