| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1873 |
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| Symbol | |
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| ID | 5199524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2098534 |
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| End bp | 2099490 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640581418 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001262371 |
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| Protein GI | 148554789 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCAGT TCGCCCTGCT GAAGGATGAG CACCGCGCGC TGCACCGCCT GCGGGCGATG
GAGGAGTCGA CCCTGGCGGG CGCGCGGCGG CTCGTGGGCG GCGCGCTGAG CGACCATGAC
CTCGCGGTGA TGGAGGACGC GCCGCTCGCG GTCGAGCTGC GGACCGCCAG CGTCGGGGCC
TTGCCGCTGG TGTTGCTCCG CTACGGCGCC GCCGTGTCGA TCGCGCCGCG CCGGCTGCCC
GCGCATCTGC TGTTCCAGGT CGTGCTGCGC GGCAGGCTGG AGGTCGAGGA CGACGATGGC
GGCTTCGTCG CGGAGGAGGG CGACGCGGTG CTGCTGGAGA ATCTCGCCGG CCGCCGGCTT
CGCTGGTCGG GCGACAGCCG GCAGCTGATC ATGCGCATCC CGCGCGCCGC CGTCGCCAGG
GCGGCGGGCA CCGACAGCGG ACCGATCCGC TTCGACCGCA CCTTCCGGCT GGACCGGGGC
GGCTGCGGGA CGCTGGAGCT GGTCCGCTAC ATCATGACGC AGGCGACGGC GGGCCGCATG
GCCGGGACCG ACGGCGCGGT CCTCGACCTG CTGATCCGCC ACCTGCTGCT GCACCATTCC
GACCATGGCG CCGCGGCGCC GCTGCCCGCC TCGATCCGCC GGGCCGAAGC CCATATGCGG
CAGAATCTCG GCGAGGCGAT CACCCTCACC GATCTGGTCG AGGCGGTGCG GAGCACGCCG
CGCACGCTGT CGGCGAATTT CCAGACGTTC CGCGGCGTCT CGCCGATGGC GCGGTTCCGG
GACCTGCGGC TGGACGCGGT CCACGCGGCG CTGGGCAATG GCGAGGCGGG CTCGGTGACC
GAGGCGGCGA CCCGCTACGG CTTCTTCCAT CTCGGCCGTT TCTCGCAGGC CTACCGGCTG
CGCTTCGGCG AGTTCCCCCG CGACACGCTG CTGGCGGCCG GCGGCCGGGA CGCCTGA
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| Protein sequence | MGQFALLKDE HRALHRLRAM EESTLAGARR LVGGALSDHD LAVMEDAPLA VELRTASVGA
LPLVLLRYGA AVSIAPRRLP AHLLFQVVLR GRLEVEDDDG GFVAEEGDAV LLENLAGRRL
RWSGDSRQLI MRIPRAAVAR AAGTDSGPIR FDRTFRLDRG GCGTLELVRY IMTQATAGRM
AGTDGAVLDL LIRHLLLHHS DHGAAAPLPA SIRRAEAHMR QNLGEAITLT DLVEAVRSTP
RTLSANFQTF RGVSPMARFR DLRLDAVHAA LGNGEAGSVT EAATRYGFFH LGRFSQAYRL
RFGEFPRDTL LAAGGRDA
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