Gene Swit_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1869 
Symbol 
ID5199275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2095046 
End bp2096071 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content75% 
IMG OID640581414 
Producthypothetical protein 
Protein accessionYP_001262367 
Protein GI148554785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.287227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.777023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGGA CGAGGCGCCA ATCGCGACGG TTGCCGTGGA GAAGGGCGGG CATCGGCCTG 
GCGATCCTGG CCTGTTCGCA CGCGGCGGCG GCGGGCGAGG GCGGCCTGCC CGCCATCGCT
GCGATCGGCC ATTTCTACGT CGCCGGACGG GAAGTATCGC ACGGCGCGCC CGGGGCGCCG
ATCGAGACCG GGCAGGTCTA TGTCCACTAT GTGCGGCTGG CGCGGCCGCG CCTGCCCGTG
CCGCTGCTGC TGATCCCCGG CGGGTCGCTG TCGGGCGCGG CCTATGAGAC GACGCCCGAC
GGGCGGCCCG GCTGGCAGAG CGATTTCCTC GCCATGGGCT ATTCGGTGCT GGTCGCCGAC
AGCGGGCAGG CGGGGCGGAC GCCCCCCGCG CCGCCGGCCG CCGGCGACGC GCCGCCGGCG
ATCCGCGACA AGGCCTTCCT CTGGGAGACG TTCCGGATCG GCCCGCCGGG ATCGTGGCGG
GCGGACCCCG CCGCCCGCCG GCCCTATCCA GCGGGGCGCT TCCCGGTCGC CGGCTTCGAC
GCCTTCGCGC GGCAGGTCTT TCCCCGCTAT CGCCCGCCGC TCGACGAGGA GGTCGCGCGC
ACTGCGGCGC TCTACGACCG CGCCTGTCCC TGCGTCGTCG TCGCGCACAG CGCGGCGGGG
CCGATCGCCG AGCGGGCGGC GCTGCTCCGG CCGGATCGGG TGGCGGCGCT GGTCCTGGTC
GAGCCGTCGG GCGGGATCGG GCTGTCGCCC GACCAGGCGG CGCGGCTGCG GGCCATCCCG
CACCTCTATC TGTGGGGCGA CCATGTCGAC CAGGACGCCG GCTGGCGCGA TCAATATGCG
GGTGCCGCGC GCGATTTCGC GATGTTGCGG AGCGCCGGGG GCGCCTCCTC CTCCGCCTGG
ATCGATCTGC CGCGACAGGG CGTCGCCGGC AATTCGCACA TGCTGATGAT GGACGACAAC
AGCCGCGCCG TCGCCCGGCG CGTCGCCCGC TGGATCGCCC GCCGGGGCAT CGATCGGCCG
CGATGA
 
Protein sequence
MEGTRRQSRR LPWRRAGIGL AILACSHAAA AGEGGLPAIA AIGHFYVAGR EVSHGAPGAP 
IETGQVYVHY VRLARPRLPV PLLLIPGGSL SGAAYETTPD GRPGWQSDFL AMGYSVLVAD
SGQAGRTPPA PPAAGDAPPA IRDKAFLWET FRIGPPGSWR ADPAARRPYP AGRFPVAGFD
AFARQVFPRY RPPLDEEVAR TAALYDRACP CVVVAHSAAG PIAERAALLR PDRVAALVLV
EPSGGIGLSP DQAARLRAIP HLYLWGDHVD QDAGWRDQYA GAARDFAMLR SAGGASSSAW
IDLPRQGVAG NSHMLMMDDN SRAVARRVAR WIARRGIDRP R