| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1856 |
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| Symbol | |
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| ID | 5199035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2075725 |
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| End bp | 2077179 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581401 |
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| Product | 3-oxoacyl-(ACP) synthase III |
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| Protein accession | YP_001262354 |
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| Protein GI | 148554772 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0653145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGGACA CAGGCATCAT CTCGATCGCG GGCTATCTCC CCCGGCGGCG GCTGTCGCGC
AAGGCGATCG TCGCGGCCAA CCAATGGGCG AACCCGGCGC TGGCGTCGCT CGGCAGCGGC
CATCGCACGA TCTGCGCGCA TGACGAGGAC AGCCTCACCA TGGCGGTCGA GGCATCCCGC
GCCTGCCTTG CCCGGGCGAC GGGCTTTGCG CCCGGCCTCG TCCAGCTCGC CAGCACGACC
CCGCCCTTCG CGGACAGGGC CGGCTCGGTG CTGCTGACGG AGGCGCTGAC CCTGTCGCCC
GACATCCGTT GCGCCGACGC CGGGGGCTAT CTCGGCTGCG GCGCCGGCGC GCTGATCGAC
GCGCTCGACG GCGGCCGGCC CGCGCTCACC GTCGCCTCGG ACAAGCGCGC CGCGAGGATC
GCCTCGGCCC AGGAACTGAG CTTCGGCCAT GCCGCGGCGG CGGTCGCGAC CGGGACCGGC
GACCTGATCG CCCGCTTCGT CGCCGCGCAC TGCCTGTCGA TCGATTTCGT CGACCATTAT
CGCTCGACGG GCGCGCGGAC CGACTATGTC CTCGAGGAGC GGTGGGTTCG CGACGAAGGG
CATATGAAGA TCGTCCCGCA GGCGATCGCC GCGCTGCTCG ACAAGGCGGG CTGGGCGATC
GGCGACATTC GCCATGTCGC GATCGCGGGC GTCTCGCGCG CGACGCTGCG GCTGATCGCC
CGGACCTGCG GGATCGACGA GGACCGGCTG GTCGACCCGC TCGACGCCGA ATGCGGCAAC
ACCGGCGCGG CCCACGCGCT GCTGATGCTG TGCCACGCGC TGGAGACGGC CGGCCCCGGC
GAGAAGATAC TGCTGCTCAA CGTCGCGCAG GGTGCGCAAG GCCTGTTGTT CGAGACCACG
GAGGCGATCG CGGAGCGCCG GGCCGAGGGA ACGGTCCGCG CCCAGCTCGA CGCCGGGCTG
GAGGACGACA ATTATCTGCG CTTCCTCTCG TTCGGCGAGC AGATCGAGGT CGACTGGGGC
ATCCGGGCGG AACGCGACAA CCGCACCGCC CTGTCGGCCT TCCACCGCCA TCGCAGGACG
ATCACCGGCT TCGTCGGCGG GCTCTGCACC GCCTGCGGGA CGCGGCAGTT CCCCAAGGGG
CCATGCTGCG TCAATCCCGA CTGCCGCAGC TTCGACACGC TGGTCGACGA ACCCTTCCAG
CACAAGGTCG GCCGGGTGCG ATCCTTCACC GAGGACTGGC TGGCGATCTC CGCCAATCCG
CCGCTGATGT ACGGCAATGT CGGCTTCGAC GACGGCGGCG TGGTGATGAT GGAGTTCACC
GATTTCGAGC CCGGCCGGCT GGGCGTGGCG ACGCCGGTCC GCTCCGTGTT CCGGATCAAG
GATCGCGATC CGAAGCGGCT CTTCCACCGC TATTTCTGGA AGGCCGCGCC TGCGGACATG
AAGGGGGCTG GTTGA
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| Protein sequence | MSDTGIISIA GYLPRRRLSR KAIVAANQWA NPALASLGSG HRTICAHDED SLTMAVEASR
ACLARATGFA PGLVQLASTT PPFADRAGSV LLTEALTLSP DIRCADAGGY LGCGAGALID
ALDGGRPALT VASDKRAARI ASAQELSFGH AAAAVATGTG DLIARFVAAH CLSIDFVDHY
RSTGARTDYV LEERWVRDEG HMKIVPQAIA ALLDKAGWAI GDIRHVAIAG VSRATLRLIA
RTCGIDEDRL VDPLDAECGN TGAAHALLML CHALETAGPG EKILLLNVAQ GAQGLLFETT
EAIAERRAEG TVRAQLDAGL EDDNYLRFLS FGEQIEVDWG IRAERDNRTA LSAFHRHRRT
ITGFVGGLCT ACGTRQFPKG PCCVNPDCRS FDTLVDEPFQ HKVGRVRSFT EDWLAISANP
PLMYGNVGFD DGGVVMMEFT DFEPGRLGVA TPVRSVFRIK DRDPKRLFHR YFWKAAPADM
KGAG
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