Gene Swit_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1855 
Symbol 
ID5199394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2074519 
End bp2075724 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID640581400 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001262353 
Protein GI148554771 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0446253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG GTATCCGGGA CAAGGTCGTC ATCCTCGGCA TGGGCTGCTC GCGCTTCGGC 
GAGCGGTGGG ATTGCAGCGC CGAGGACCTG ATCTCCGAAT CCTTCCGCGA GGCGATCGCC
GATGCCGGCA TCGACCGGGA CCAGATCGAG GCGGCGTGGT TCGGCCTTTC GATGGACGAG
CAGAATCTCG GCAAGTCGGC GCTGTCGCTG TCGCAGACGC TCCGCCTGCC GAACATCGCC
GCGACCCGCG TCGAGAATCT GTGCGCGACC GGCTCCGAGG CGCTGCGCGG CGCGGTCTAT
GCGGTTGCCG CCGGCGCCGT CGACATCGCC CTCGCGCTCG GCGTCGAGAA GCTCAAGGAC
ACCGGCTATG GCGGCCTGCC CGAGCGCAGC AAGGGCACGT TCAACGACCT GTGGCAGCCC
GGCGCCACCG CGCCCGGATC GTTCGCCCAG TTCGCCAGCG CCTATACCGC GCGCCACGGC
GTCGACATGG CCACGCTCAA GGAGGCGATG GCGCACATCT CGTGGAAGAG CCACGAGAAC
GGGTCGAAGA ACCCCAAGGC GCATCTGCGG CAGCGGCTGT CCAAGGAAGC GATCGTCAAG
GCGCCGATGG TCGCCTATCC GCTCGGCCTG TTCGATTGCT GCGGGGTCAG CGACGGATCG
GCCTGCGCGA TCGTCGCCAG CCCGGAAATG GCGATGCGCC TCGGCCGCAC CGGCGAGCTG
GTCAGCGTCA AGTCGATGCA GCTCGCGCTC AGCAACGGTT CGGAGATGTC GCACGACGCG
TGGGACGGCA GCTATGCCCA CACGACGCGC ATCGCATCGC GCAAGGCCTA TCGCGAGGCC
GGCATCGTCG ATCCGGTGAA GGAGCTCGAC CTGGTCGAGG TCCACGACTG CTTCTCGATC
ACCGAACTCG TGACGATGGA GGACCTCGGC CTGTCGCAGC CCGGCATGGG CTATCGCGAC
GTCCTGGCGG GCAAGTTCGA CGCCGACGGC GAGGTGGCGA GCAACATCGA CGGCGGCCTC
AAATGCTTCG GCCATCCGAT CGGCGCGTCG GGGCTGCGGA TGGTCTATGA AGGCTATACC
CAATTGCTGA ACCGCGCCGG CGATCGCCAG CTCAGCCGGC CGCGCCGGGC GCTGACCCAT
AATCTGGGCG GCTTCCCCAA TTACAATGTC TGCAGCATCT CGATCCTCGG CCTGCTCGGC
AGCTGA
 
Protein sequence
MAEGIRDKVV ILGMGCSRFG ERWDCSAEDL ISESFREAIA DAGIDRDQIE AAWFGLSMDE 
QNLGKSALSL SQTLRLPNIA ATRVENLCAT GSEALRGAVY AVAAGAVDIA LALGVEKLKD
TGYGGLPERS KGTFNDLWQP GATAPGSFAQ FASAYTARHG VDMATLKEAM AHISWKSHEN
GSKNPKAHLR QRLSKEAIVK APMVAYPLGL FDCCGVSDGS ACAIVASPEM AMRLGRTGEL
VSVKSMQLAL SNGSEMSHDA WDGSYAHTTR IASRKAYREA GIVDPVKELD LVEVHDCFSI
TELVTMEDLG LSQPGMGYRD VLAGKFDADG EVASNIDGGL KCFGHPIGAS GLRMVYEGYT
QLLNRAGDRQ LSRPRRALTH NLGGFPNYNV CSISILGLLG S