Gene Swit_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1853 
Symbol 
ID5199392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2073211 
End bp2073690 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content70% 
IMG OID640581398 
Producthypothetical protein 
Protein accessionYP_001262351 
Protein GI148554769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0381844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG TCACGATCGA CGACGTCGAA CCGGGCCAGC AGATCCCCGT GCTGTCCTTC 
CACGTCACCG CGTCGCGGCT GATCGCCGGG GCGTTCGCGA GCCGGGACTA TTCCCCCCTC
CACCATGACA GGGACTATGC CGTCGACGTC GCCGGACAGC GCGACATCTT CGCCAACACC
CAGTTCCAGG CGGCGCTGTT CGAGCGCTAT CTCAACGACT GGTCGGGTCC GCTGGGACGG
ATCGCCCGGA TGACCTTCCG GATGACCTCG TCGGTCTTCG CCGGCGACCT CGTGTCGCTG
ACCGGGACGG TCGACCGGGT GCTGCGGTCC GGGCCCTGCG CGCCGGCCGC ATCGATCCTG
ATCGCCATGG CGGTGGACGA GCGGACCGCG ACCGCGTGCG AGATCCTCTA CGCGCTGCCC
GCCGCCGCCG GGGACAATCC CTGGCGGCGG CGCGGCGAGG GCTGGCTGCA ACCGGCGTAA
 
Protein sequence
MNLVTIDDVE PGQQIPVLSF HVTASRLIAG AFASRDYSPL HHDRDYAVDV AGQRDIFANT 
QFQAALFERY LNDWSGPLGR IARMTFRMTS SVFAGDLVSL TGTVDRVLRS GPCAPAASIL
IAMAVDERTA TACEILYALP AAAGDNPWRR RGEGWLQPA