| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1821 |
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| Symbol | |
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| ID | 5199368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2037129 |
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| End bp | 2039267 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581367 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001262320 |
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| Protein GI | 148554738 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC TCGGACGGTG CGACGGCATG GGGATGAGGA AGCGGGCCGG ATGGTCGGTG
TCGCTGCTGG CGATCGGCGC GGTCGGCCTC TGGGCCGGCG CGGCGCAGGC GGAGACGGCG
CCCGAGCCGG CCGATGCGGC GGGCGGCGAC ATCGTCGTCA CCGGCTATCG CTATCTGAGC
GAGGACACCA GCGGCACCAC CGGCCTGCCG CTGTCGATCG AGTCGGTGCC GCAGTCGATC
AGCCTGGTGA ACCAGGACTT CCTGAAGGCG ACCGACATCA AGACGCTGGG CGAGGTCGCG
CAATATACGC CGGGCGCGCT GTTCGACGGC AATCCCGGTG GCTTCGGCTC GGTGGTCAAG
CTGCGCGGCT TCACCTCGGG CAACGCGATC GACGGGCTCA ACGTCGGCCT GCTCGACTTC
GAGCCCGACT TCGCGACGCT CGAACGGCTG GAGATCGTCA AGGGCCCGAC CTCGGTGGTC
TATGGCGCGG CCAATCCGGG CGGCATCATC AACCAGGTGA CCAAGAGCGC GCGGGCCGAC
ACGCCGTCCT ATGTCCAGGT GCTGGGCGGA TCATGGGGCC GCTGGCGCGC TGAGGGGCAG
GTCGCGGGCG CGCTCAACGA GGCCGGAACG ATCCGCGCGA TCGGCGTCGC CGCGCATGAG
GAGGCGGGCA GCTTCATGAA GCGCGTCGAT TCGGCCAAGA CGGTCGCCTA TCTCGGGCTC
GACGCCGACC TGACCGATAC GCTGAGCGGC TATCTCCATG GCGGCTACGA ACATTATCGG
CGCACCCCGT TCGACGGCAT CCCGACCCTG CCCGACGGAT CGCCCGCGCC GGTCGGCCGC
TCCTTCTTCA TCGGATCGGG GGACTTCGAC ATCGTCACCC GCGTCAAGCG GGTCAATGGC
GGTCTGAACT GGGAGCCGTC GTCGGCCTGG TCGGTCAGCC TCAAGCTCAA TTATCTCTAT
TACAACACCA CCGGCCAGTC GGGCTTCGGC TTCGACCTGC AACCGAATGG CGACTTCTTC
CTCGCGGCGC AGCGCTACAC CAAGAACGAC CAGGAATCGT TCAGCGCCGG GCTGTCGAGC
CTCTACAAGC TCGACGATCT CGGCCTTGCC GGCAGCTTCG TCACCGTCGC CGCCAATTAT
CAGGACTATC GGACCCAGTC GAACGGGCTG GTGCCCGACC TGCCCAACGA CATGGCCAAT
ATCTTCGACG GCATCCCGGC GATCGAGGCG GCGCTCAACG CCGCACAATA TCCGGGCTAT
GCCTATGCGC TGGGGCGGCG GCTGCGCTAC CTGACGCTCT CGGGCCAGGC CGACATCAAG
GTCGCGGAGC CGCTCACCCT GCTCGGCGGC ATCTCCTGGT CCAAGCCCGA CGTGACCAAG
CGATCGGGCA CCGGCCCGCG CCAGGACTTC AGCGGCGACA GCCAGACCAG CCTGCGCCTC
GCCGCGACGC TGGAGCCGGT CAAGGGGCTC AACATCTATG CGTCCTACAG CGAATCCTTC
CAGCCGCAGC TGTTCATCGA CACCGCCGGC AACGTGCTCG CGCCGCTATC GGGCGAGCAA
TATGAACTGG GCGTCAAATA TGTCTCGTCC GACCGGCGCC TGCTGCTGAG CGGCGCGCTG
TTCGACGTGC GCCAGGCGAA CCAGGCGCGC TACGACCAGA CCGTCAACCT GATCGACCGC
TACAAGGCGA TCGGCGAGGT GCGCCACCGC GGCCTGGAAT TGCAGGCGGT GGGCGAGATC
GTCCGCGGCT GGCAGGTCAA TGCGGGCCTG AGCCTGCTCG ATCCGAAGAT CCGCGAGGAC
GACGATCCGA CGCTGATCGG CACGACCGTC ACCTTCCTGC CGAAGACGAC GGCGAGCCTG
TTCACCAGCT ACATGTTCGA CAACGGCCTG CTGCTCGGCG GCGGCGCCCG CTATGTCGGT
TCGGTGAACA CCGCCTATGA CGGATCGACC CGCGACATCG CGTCCTACAC GCTGGTCGAC
GCCTCGGCCG GCTACAGCTT CGACGGATGG CGGTTGCAGC TCAACCTCAA GAACCTGTTC
GACAAGAAAT ATTACATCAA CAACTATCAG ACGCTGTTCT ACGGCAATGT CGTCGGCGAA
CCGCGCAGCT TCACCATTTC GGTGCGGAGG GATTTTTGA
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| Protein sequence | MKTLGRCDGM GMRKRAGWSV SLLAIGAVGL WAGAAQAETA PEPADAAGGD IVVTGYRYLS
EDTSGTTGLP LSIESVPQSI SLVNQDFLKA TDIKTLGEVA QYTPGALFDG NPGGFGSVVK
LRGFTSGNAI DGLNVGLLDF EPDFATLERL EIVKGPTSVV YGAANPGGII NQVTKSARAD
TPSYVQVLGG SWGRWRAEGQ VAGALNEAGT IRAIGVAAHE EAGSFMKRVD SAKTVAYLGL
DADLTDTLSG YLHGGYEHYR RTPFDGIPTL PDGSPAPVGR SFFIGSGDFD IVTRVKRVNG
GLNWEPSSAW SVSLKLNYLY YNTTGQSGFG FDLQPNGDFF LAAQRYTKND QESFSAGLSS
LYKLDDLGLA GSFVTVAANY QDYRTQSNGL VPDLPNDMAN IFDGIPAIEA ALNAAQYPGY
AYALGRRLRY LTLSGQADIK VAEPLTLLGG ISWSKPDVTK RSGTGPRQDF SGDSQTSLRL
AATLEPVKGL NIYASYSESF QPQLFIDTAG NVLAPLSGEQ YELGVKYVSS DRRLLLSGAL
FDVRQANQAR YDQTVNLIDR YKAIGEVRHR GLELQAVGEI VRGWQVNAGL SLLDPKIRED
DDPTLIGTTV TFLPKTTASL FTSYMFDNGL LLGGGARYVG SVNTAYDGST RDIASYTLVD
ASAGYSFDGW RLQLNLKNLF DKKYYINNYQ TLFYGNVVGE PRSFTISVRR DF
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