| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1810 |
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| Symbol | |
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| ID | 5200568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2023934 |
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| End bp | 2026246 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581356 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262309 |
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| Protein GI | 148554727 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGG CGGGGGCGCT GGCGCAGCCG GCGCTCGCCC GCGATCTGCG CTCCTTCGAC
ATCAAGCCGG GCCGCCTGTC CGAAGCGATC GTCGCGCTGG GCGTGCAGGG CGGCGTCAGC
ATCGGCCTGC CGAGCGCCTC CGCCCAGAAC CTGCCGGTGC CCGGCGTGCG CGGGCGGCTG
TCGGTCGACC GGGCGCTGCG CCGGCTGCTC GCGGGAAGCG GCCTCCACGC CGTGCGGATC
GACGACCGCA GCTATACGAT CGCGGCGGAC CGGGCGAAGC CGCGAACCGC GCCGGTGGCA
GCCCCCGCCG GGCCGGTCGC CGCCCCGCCC GACATCATCG TCACCGCCAG CAAGCGCGAC
ATCCGCCTGC GCGACTTCCC CGGCACCATC GCGATGATCG ACGCTGCCGC CGCCGGGCTG
AACGGCAACG CCCGCTACGG GACCCAGGCG CTGGTCGACA TCATCCCCAG CCTGTCGTCG
ACGCATCTCG GCCCCGGCCG CAACAAGCTG ATCATCCGCG GCGTCGCCGA CAGCAGCTTC
ACCGGCCCCA CCCAGGCGAT CGTCGGCCAG TATCTCGGCG ACATCCGGCT CAACTACAAC
GCGCCCGATC CCGATCTGAA CCTCTACGAC ATGGCCGGGG TCGAGGTGCT CGAAGGACCG
CAGGGGACGC TCTACGGCGC GGGGTCGCTC GGCGGGATCG TCCGGCTGGT GCCGACCCCG
CCCGACCTGT CGCAGGCCGC GGGATCGGTC GCGGCCGGGA TCGGCAAGGT CGAGGGCGGC
GGGCCGAGCA ACGACCTTGC CGGCATGATC AACCTGCCGA TCAGCACCGG CCGGATCGCC
CTGCGCGCGG TCGCCTATCG TTCGGTCGAC GGCGGCTATA TCCGCGACGC CGAGCGCGGG
TTGAACCACG TCAACCGATC GAAGGCGGCG GGGGGACGGA TCACCCTGCG CGCCCGGCTC
GGCGACTGGA CGATCGATGC CGGCGGCACG CTGCAGGACA TGCAGAACCG CGACGGCCAA
TATGCCGAGC GCGACCAGCC CCGCTACACC CGGCGCAGCG CGATCGCGCA GCCCTTCGAC
AACGACTATC GGCTGGGCCA GATCGTCGTC ACCCGCAAAT GGAACGACAT CACCCTGCTG
TCGGCGACCG GCATCGTCGG CCATGACGTC GACGAGCAGT TCGATGCGAC GCGCGCGCGG
GACACCAGCC CGCGCCTGTT CCACCAGCAC AGCCAGATCA CCCTCTTCTC GAACGAGAAC
CGGCTGAGCC GCCAGAATCC CGACGGGACC GGCTGGCTGG TCGGCACCAG CTTCGTGTCG
AACAGCGAGC GGCTGATCCG CGACCTGGGC GCGGCGACGG CGCCGGCCCG GATCGCCGGC
GTCCGCAACT CGGTGCGCCA GATCGCCGCC TATGGCGAGC TCAGCCTGGG TCTCGGCCCG
CTGATCGTCA CCGCCGGCGG GCGGCTGGCG CACAGCCGGC TGACCGGCGA ACTGCTCGAC
GACGGCAAGG ACAAGAACGA GCCCAATCGC AGCGAGGTCG AGGTGCTGCC GTCGATCGCG
GTGAGCTGGC GCCCCACGCC GCGCCTGACC ACCTACCTCC GCTACCAGGA GGGCTTCCGC
CCCGGCGGCC TGTCGGTCGC GGCGGGCAGC GGCGGGATCG TCTCGCAACG CTTCCTCGGC
GACAGCATCG TCACGATCGA GGGCGGAGCG CGCTTCGGCC ATCCGGTGCA GGACCGCTTC
TCCGCCGCGC TCAGCCTGTC GTACAGCCAT TGGGAGCATA TCCAGGCCGA CCTGGTGAAC
GGCGCGGGGC TGCCCATCAC GGCCAATATC GGCAATGGCC GCATCCTCGG CTTCGAGGCG
AGCCTGCGCT GGGCGCCCTT CGCGGGCTTC GCGGCCGAAG GCGGACTGTT CCTCAACGAC
AGCGAGCTGA CCAGCCCTTC GGCGGGATTC GAGGACGCCG CCCATGCCGA ACTGCCCAAC
ATAGCGCGCG TCGGCGTGCG CGGGGCGCTC AGCTACGATC GGCCGATCGG CGGCGGCCTG
TCGCTGTCGC TGACCGGATC GGTGCGCTAT TTCGGCCATT CGCAGCTCGG CGTCGGCAGC
CTGCTCGCCA TCGAGCAGGG CAATTATGCC GACACCGCGC TCGGCCTGCG GATCGGCACC
GAGCGGCTTG GCGCGTCGAT CGACGTGACC AACCTGTTCG ACGCGGCCCA GAACCGCTTC
TCGCTCGGCA ACCCGTTCGG CGTGATGGAC AGGCTCCAGG TCACGCCGCA GATTCCCCGC
ACCGTCCGGA TCGGCGTCGA TGCCCGCTTC TGA
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| Protein sequence | MAMAGALAQP ALARDLRSFD IKPGRLSEAI VALGVQGGVS IGLPSASAQN LPVPGVRGRL
SVDRALRRLL AGSGLHAVRI DDRSYTIAAD RAKPRTAPVA APAGPVAAPP DIIVTASKRD
IRLRDFPGTI AMIDAAAAGL NGNARYGTQA LVDIIPSLSS THLGPGRNKL IIRGVADSSF
TGPTQAIVGQ YLGDIRLNYN APDPDLNLYD MAGVEVLEGP QGTLYGAGSL GGIVRLVPTP
PDLSQAAGSV AAGIGKVEGG GPSNDLAGMI NLPISTGRIA LRAVAYRSVD GGYIRDAERG
LNHVNRSKAA GGRITLRARL GDWTIDAGGT LQDMQNRDGQ YAERDQPRYT RRSAIAQPFD
NDYRLGQIVV TRKWNDITLL SATGIVGHDV DEQFDATRAR DTSPRLFHQH SQITLFSNEN
RLSRQNPDGT GWLVGTSFVS NSERLIRDLG AATAPARIAG VRNSVRQIAA YGELSLGLGP
LIVTAGGRLA HSRLTGELLD DGKDKNEPNR SEVEVLPSIA VSWRPTPRLT TYLRYQEGFR
PGGLSVAAGS GGIVSQRFLG DSIVTIEGGA RFGHPVQDRF SAALSLSYSH WEHIQADLVN
GAGLPITANI GNGRILGFEA SLRWAPFAGF AAEGGLFLND SELTSPSAGF EDAAHAELPN
IARVGVRGAL SYDRPIGGGL SLSLTGSVRY FGHSQLGVGS LLAIEQGNYA DTALGLRIGT
ERLGASIDVT NLFDAAQNRF SLGNPFGVMD RLQVTPQIPR TVRIGVDARF
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