| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1808 |
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| Symbol | |
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| ID | 5196382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2022312 |
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| End bp | 2022977 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581354 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001262307 |
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| Protein GI | 148554725 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGTCC TTATCGCCGA TCGCCGCATG ACCCGCCTAC CGTCCCCGGT CGCGCGCGGC
TATGAGGTTG GCTCGACAGC GCCGAACGAG ACGAATCGCA TGACCGGGGA CGGCCTCGAA
GCCATCTTCA TGACCCATCG CCCGATGCTC TCGCGCTTCT TCGCGGCGCG CGGCGCGGGC
GCGGACGTCG AGGACCTGCT GCAGGAACTG TGGCTCAAGG CGCGGTCGGC GCAGACCGGG
CCGATCGCCG ATCCCGCCTC CTACCTGTTC CGCATGGCTG ACAACCTGCT GCTCGACCGC
CGCCGCGCCG ACCTGCGTCG CAGCCGCCGC GACGACCAGT GGACCGGCAT GACGCGCGGC
AGCGTCGTCG ACGTCTCCGA CACGCCGTCG GCCGAACAGG TGCTGATCGC CCGCGAAAGG
CTCCGCATCG TCGACCGCGC GATCGACGCG CTCGGCGAGC GGACCGCCGC GATCTTCCGC
AGCTACCGGA TCGACGGCCT CAACCAGCGA GACATCGCCG CGCGGATCGG CATCAGCCTC
AGCGCGGTCG AAAAACATCT CCAGAAGGCC TATCGTGCGC TGGTGGAGGT TCGCGGCCGG
CTGGATGCGG ATTCCCCGGC TCCGCGTCGT CTCGACGTCG AAGGAACGAA CGATGTCGCA
GATTGA
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| Protein sequence | MAVLIADRRM TRLPSPVARG YEVGSTAPNE TNRMTGDGLE AIFMTHRPML SRFFAARGAG
ADVEDLLQEL WLKARSAQTG PIADPASYLF RMADNLLLDR RRADLRRSRR DDQWTGMTRG
SVVDVSDTPS AEQVLIARER LRIVDRAIDA LGERTAAIFR SYRIDGLNQR DIAARIGISL
SAVEKHLQKA YRALVEVRGR LDADSPAPRR LDVEGTNDVA D
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