| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1796 |
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| Symbol | |
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| ID | 5198239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2008712 |
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| End bp | 2010886 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581342 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001262295 |
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| Protein GI | 148554713 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCACC TCTCCGCCAT CACCCGCCTG TCGGCCGACG AGCTCCTGCT CGCGAGCCGG
GAGGTCGACA CGGGGCTGCG GCACAGCGAC CTGTCGGTGC CCGGCATCCG CTGCGGCGGC
TGCATACGCA AGATCGAGGA TGCGATCGGC CGGCTGCCCG GCGTGACGCG GGCGCGCGTC
AACCTGTCGA CCCGGCGCGT GGGCGTGGAC TGGCAGGAGA GCGCGGGGCC GCCGCCGCTC
GGCGAGACGC TGACCGGGCT CGGCTACGAC GCCTATCTCC ATGAGGCGCG CGAGGACGCG
AAGGACCCGC AGCTCGGCCG GATGATCCGC GCGCTGGCGG TCGCCGGCTT TGCCGCGATG
AACATCATGG GGCTGTCGGT TTCGGTCTGG TCGGGCGCGG CCGGCGAGAC GCGGGACCTG
TTCCACTGGC TGTCGGCGGC GATCGCGCTG CCGACGCTTG CCTATTCGGG CAGGATCTTC
TTCCGCTCGG CATGGCAGGC GCTGCGGCGC GGCCAGACCA ACATGGACGT GCCGATCTCG
CTGGGCGTGC TCCTCGCCTT CGCGATGAGC CTCTACGACA CGATCCATCA CGCATCCTAC
GCCTATTTCG ATGCGGCGGT GTCGCTGCTG TTCTTCCTGC TGATCGGCCG GACGCTCGAC
CATGTGATGC GGGAGAAGGC GCGGACGGCG GTGAAGGGGC TCGGCCGGCT CGCCGCCTAT
GGCGCGACCA TCGTCACGCC CGACGGCGGC CGCGCCTATG TCGGGACCGA GGAGATCGAG
CCCGGCATGA CCATATTGCT GCGGCCGGGC GACCGGATTC CGGTCGACGC GGTCGTGATC
GAGGGGCGAT CCGACATCGA TGCCGCGCTC GCGACCGGGG AAAGCCTGCC TGAGCCGGTC
GTTCCCGGCA GCGGGCTGCG CGCGGGGACG CTCAACCTCA CGGGGCCGCT CACCATCCGC
GCCATCGCTG CGTCGAAGGA CAGCTTCCTG GCCGAGATGA TGCGGCTGAT GGAGGCGGCC
GAAGGCGGGC GGACCCAGTT CCGCCGCATC GCCGATCGCG CCGCCCGGCT CTACGTCCCG
GTGGTCCACA GCGCGGCGCT GCTCGCCTTC CTGGGCTGGA TGGCGGCGAC CGGCGACTGG
CACCAGGCGC TGACCATCGC GGTCGCGGTG CTGATCATCA CCTGTCCCTG CGCGCTCGGC
CTCGCGGTGC CGATGGTCCA GGTCGTGGCC GCCCGGGCGC TGTTCGAGCA TGGCGTCATG
GTCAAGGACG GCTCCGCCAT GGAGCGGCTC GTCGAGGTCG ACAGGACGTT GTTCGACAAG
ACCGGCACGC TGACCCTGGG GCGTCCCCGG CTGCGGCCGG ACGCCGCCGT CGATCCGGCC
CATCTGGCGA TCGCGGCGCG GATCGGGGCG CAGTCGCATC ACCCCTATGC CCAGGCGCTC
GCGGCGGCGG CGGCACCCGC CGACATCGCC TTCGACAGCA TCGTCGAGCA TGCCGGGCTC
GGCCTCGAAG CGCGGATCGG CGACGATCTG TGGCGGCTCG GGCGCGGCGC GTGGGCGGTT
GATGGGGACC AGGCTTCCGA GGCCGAGGGC ACGGTGCTGT CGTGCAACGG CAAGCTCCTC
CACGCCTTCC TGTTCGAGGA CGAGCTGCGG CCGGGAGCGG AGGCGGCCGT CGCCACGCTC
CGCGCGCGGG GCCATGCGAT CGAGATCATG TCGGGTGACA CTCCGGACGC GGTCGCGCCG
GTCGCCGCCG CGCTCGGGAT CGACACGGTG CAGGCGGCGC TGCTGCCGGC CGAGAAGACC
GCCCATCTCG AGGCGCTCGC CGCCGCCGGG CACAAGACGC TGATGGTCGG CGACGGACTC
AACGATGCGC CGGCGCTGGT CGCCGCCCAT GTCTCGATGG CGCCGGGCAG TGCCGCCGAT
GTCGGGCGGC AGGCCGCGGA TTTCGTGTTC CTGCGGCCCG ACCTCGACAG CGTGACCTAT
ACGATCGCGA TCGCGCGCCG CGCCGACCGG CTGATCCGGC AGAATTTCGC GTTCGCCGCG
CTGTACAACC TGGTCGCCCT GCCGGTCGCC GTGGCGGGCT ATGTCACGCC GCTGATCGCC
GCGCTGGCGA TGTCGGGGTC TTCGATCATC GTCGTCGCCA ACGCGCTGCG GCTCGGCCCG
CGCGGCGGCG CATGA
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| Protein sequence | MTHLSAITRL SADELLLASR EVDTGLRHSD LSVPGIRCGG CIRKIEDAIG RLPGVTRARV
NLSTRRVGVD WQESAGPPPL GETLTGLGYD AYLHEAREDA KDPQLGRMIR ALAVAGFAAM
NIMGLSVSVW SGAAGETRDL FHWLSAAIAL PTLAYSGRIF FRSAWQALRR GQTNMDVPIS
LGVLLAFAMS LYDTIHHASY AYFDAAVSLL FFLLIGRTLD HVMREKARTA VKGLGRLAAY
GATIVTPDGG RAYVGTEEIE PGMTILLRPG DRIPVDAVVI EGRSDIDAAL ATGESLPEPV
VPGSGLRAGT LNLTGPLTIR AIAASKDSFL AEMMRLMEAA EGGRTQFRRI ADRAARLYVP
VVHSAALLAF LGWMAATGDW HQALTIAVAV LIITCPCALG LAVPMVQVVA ARALFEHGVM
VKDGSAMERL VEVDRTLFDK TGTLTLGRPR LRPDAAVDPA HLAIAARIGA QSHHPYAQAL
AAAAAPADIA FDSIVEHAGL GLEARIGDDL WRLGRGAWAV DGDQASEAEG TVLSCNGKLL
HAFLFEDELR PGAEAAVATL RARGHAIEIM SGDTPDAVAP VAAALGIDTV QAALLPAEKT
AHLEALAAAG HKTLMVGDGL NDAPALVAAH VSMAPGSAAD VGRQAADFVF LRPDLDSVTY
TIAIARRADR LIRQNFAFAA LYNLVALPVA VAGYVTPLIA ALAMSGSSII VVANALRLGP
RGGA
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