| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1794 |
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| Symbol | |
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| ID | 5200538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2006562 |
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| End bp | 2008556 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581340 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262293 |
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| Protein GI | 148554711 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCC GGACATCAGC CAGAACGAGC GGGCTGCTCG CGACGCTCCT GCTGGCGGCC
GCTCCGCAGG CCGCGCGGGC CGCCGAACTG GGCTTTGACG ACGACGCGAA CACCATCATC
GTCACCGCCC GCCATGCCGC GGACGAGGCC GAGCGCCGCG CCGATGCGAC GCCGGGCGGC
ACCGACGTCG TGACCTACCA GGACTATGCC GACAAGGCGC TGGTATCGCT GCGCGACACC
CTCGCCTTCT CGCCCGGCGT CTATGTGCAG CCGCGCTTCG GGCAGGAGAT CCGCATCTCG
ATCCGCGGCT CCGGCCTCTC GCGCGGCTAT CATATGCGCG GGCTTACGCT GTTGCAGGAC
GGCATCCCGA TCAACCTGGC CGACGACAAT GGCGACTTCC AGGAACTCGA ACCGACCCTC
TTCGATCATC TCGAGGTCTA TCGCGGCGCC AATGCGCTGC GCTTCGGATC GGGCACGCTC
GGCGGCGCGA TCAACGGCGT CTCCCCCACC GGCGATCTCG CGCACGGCCT CTATGCCCGG
CTCGACCTCG GCGCCTACGC CATGGTGCGC GGGCTCGCCT CGATCGGCGT GGGCGATGGC
GACGCCAATG GCTGGTTCGC GATCAGCGCC GACCGCCATG CCGGCGACCG CGGCCATGCC
CGGCGCCATT CGCTGCGCTT CAACGGCAAT ACGGGCTTCC GCCTGAGCGA TCGCATCGCC
ACGCGCTTCT ACGTCAGCGC CAACGCCATC GACCAGCAAC TGCCGGGCGC GCTGACCCGA
TCGGTCGCGC TCGCCCGTCC CCGGACCGGC AATTTCGCGG GCGACCAGGC GCGCGACATC
ACCTCGCTGC GGCTCCAGAA CCGGACGACG CTGGACCTCG GCCGGGCGAC GATCGACTTC
GGCCTGTTCC TCAACCTCAA GGCGCTGTTC CATCCGATCT ACCAGCTGAT CGACCAGGGC
TCGACCGACC GGGGCCTGTT CGCGCGCCTC GACTATGGCG CGGGCCCGTT CGAGCTGACC
CTGGGCGGCG AATCGCGATG GGGCACGACC CATGCGCGGC GCTTCGTGAA CGTCGACGGC
CGTCGCGGCG TCCCGACCTT CGACGCCCGG CAGACGGCGC GCACCTCGAC CCTCTACGCC
GAGGCCAGAT TCCGGCCGCT CGCCGGCCTG CAACTCATCG CCGGCGCGAT CCATGCCGAC
GGCTATCGCC GGCAGGTCCA GTCGCTGCCG GCGCCGGTCG TCGGCAAGGC CGCCTATGAC
GGCTTCTCGC CCCGCTTCGG GCTGCTCTGG GAGCCGACGC GCGACGTCCA GCTCTATGCC
AATCTCAGCC GCTCGGCCGA GTTCCCGACC TTCGTCGAAC TCGCCCAGGT CGCGGCCTTC
GTGCCGATCC GCGCGCAGCA TGCCTGGACG GCCGAGGTCG GGACGCGCGG GCGACGCGGG
CGGCTGCGGT GGGACCTGTC GCTCTACCGG GCGCGACTGC GCGGCGAGAT GTTGCAGTTC
ACCGTCGGCC CCGACATCCC CGCCTCGACC TTCAACGCCG ATCGGACGGT GCATCAGGGG
ATCGAAGCCG GGCTGAGCCT GGAGCCCACC GGCTGGCTCC GCCTCCGCCA GCTCTGGCAA
TATTCCGACT TCCGCTTCCG CGACGACGCC CAGTTCGGCG GCAACCGCCT GCCCGTGGTG
CCGCGCCACG TCCTGCGCAC CGAAATCCGC TTCGGCACCG AAGCGCTGCA TGTCGCGCCC
AATCTTGAAT GGGTGCCGCA GGGGGCCTGG GCCGACTATG CCAACCGGAC CCGCGCGCCG
GGCTATGCGC TGGTCGGGCT GACCGCCGGA GCGGCCCTCG CCAAGGGCGT CGACCTGTTC
GCCGACATCC GCAACCTCAC CGGCCGGAAG GCGATCGGGG ACATCTCCGC CGTGATCGCC
GCGACGCCGG CCTCGGAGAT ATTCTATCCC GTCGAGCGGC GCTCCATCTA TGTCGGGGCG
CGGGCGCGCT TCTGA
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| Protein sequence | MPVRTSARTS GLLATLLLAA APQAARAAEL GFDDDANTII VTARHAADEA ERRADATPGG
TDVVTYQDYA DKALVSLRDT LAFSPGVYVQ PRFGQEIRIS IRGSGLSRGY HMRGLTLLQD
GIPINLADDN GDFQELEPTL FDHLEVYRGA NALRFGSGTL GGAINGVSPT GDLAHGLYAR
LDLGAYAMVR GLASIGVGDG DANGWFAISA DRHAGDRGHA RRHSLRFNGN TGFRLSDRIA
TRFYVSANAI DQQLPGALTR SVALARPRTG NFAGDQARDI TSLRLQNRTT LDLGRATIDF
GLFLNLKALF HPIYQLIDQG STDRGLFARL DYGAGPFELT LGGESRWGTT HARRFVNVDG
RRGVPTFDAR QTARTSTLYA EARFRPLAGL QLIAGAIHAD GYRRQVQSLP APVVGKAAYD
GFSPRFGLLW EPTRDVQLYA NLSRSAEFPT FVELAQVAAF VPIRAQHAWT AEVGTRGRRG
RLRWDLSLYR ARLRGEMLQF TVGPDIPAST FNADRTVHQG IEAGLSLEPT GWLRLRQLWQ
YSDFRFRDDA QFGGNRLPVV PRHVLRTEIR FGTEALHVAP NLEWVPQGAW ADYANRTRAP
GYALVGLTAG AALAKGVDLF ADIRNLTGRK AIGDISAVIA ATPASEIFYP VERRSIYVGA
RARF
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