| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1787 |
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| Symbol | |
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| ID | 5200474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2001064 |
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| End bp | 2001492 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640581334 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001262287 |
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| Protein GI | 148554705 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.572152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCTGTC ACAGCGAAGC AACCATGGGC AGGGACATGC ACAAGATCAC GATGCCGGAC
GGCGTATTCG AACCCGTGAA GGGCCTTTAT TCGCAGGTGA TCACGACAAG CTCGCCGATC
CGGCACGAGA TTGCCGGGTC GCTCGCCTAT GACGCCGAGG GCAGGCTGCC CGAAACGCTG
GCCGACCAGT GCCGGGCGGT GATGCGCAAC ATCGACCTGT CGCTGCAATC GGTCGGCATG
GCCCCGGCCA ACGTCATCCG CATGCGCATC TACACGCTCG ACATGGACGC CTTCCTCAAG
GAGGGGCTGC CGATCGTGTT CGGCTATTTC GGCGAAACCC GGCCGACCTC GACGCTGGTG
CAGATCACGC GGCTCGCCAA CCCGAAGATG CTGGTCGAGA TCGACGCGAC CGCCGCCCCC
TTCGACTGA
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| Protein sequence | MPCHSEATMG RDMHKITMPD GVFEPVKGLY SQVITTSSPI RHEIAGSLAY DAEGRLPETL
ADQCRAVMRN IDLSLQSVGM APANVIRMRI YTLDMDAFLK EGLPIVFGYF GETRPTSTLV
QITRLANPKM LVEIDATAAP FD
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