| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1785 |
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| Symbol | |
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| ID | 5200472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1999017 |
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| End bp | 2000396 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581332 |
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| Product | hypothetical protein |
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| Protein accession | YP_001262285 |
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| Protein GI | 148554703 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.211733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGGA CGCTCATCCG CAACGGCAGG GTGGTGACGG TCGATCCCGC GCTCGGCGAC
ATCGACGATT GCGACATCCT GATCGTCGGC GACCGCATCG CAGAGGTGCG GCCGGCGATC
GACGCCGACG CCGACGAGGT GATCGACGCC CGCGACAAGA TCGTCATACC GGGCCTCGTC
AACGCGCATC TCCATACCTG GCAGACCGGG TTGCGCTCGA TCGGCAGCGG ATGGACCGGG
CCGGACTATC ACCGCATCGT CCATGGCAAT ATGGGCACCC GCTTCCTGCC CGACGACAAT
CATGTCGGGA CGCTGCTCGG CGCGCTCGAG CAGTTGAGCG GCGGCGTCAC CACCATCTTC
GACTGGTGCC ACGACATCAC CTCGATCGAC TATGCCCATC GCTCGATCGA CGCGCTCGAC
GAGGCGGGCA TCCGCGCGGT GTTCGGCCAT GGATCGGCCA AGCCGAACGC GGCGCCGGGC
GAGCTGCCCT TCACCCATAT CCCCCATCCG CGCGAGCGGG TGGAGGCGCT GCGGAACGGC
CGGTTGTCGT CCGACGACGG GCTGGTGACG CTGGCGGTGG CGATCCTCGG GCCGCAATTC
TCGATCCCCG AGGTGGTCGA GCATGATTTC CGCATGGTGC GCGACCTCGG CCTGCCGTCG
AGCTCGCACG CCGCGCGCCG GCCCAAGGAC TGGGTGTCGC CCGAGGGCTT CCACATCCCG
GCGCGGCTCG GGCTGCTCGA CGCGCGGCAC AATGTCGTCC ACGCCAACTA TATCGGCGAC
GAGGAGCTCA AGCTGATCGT CGACTGCGGC GCGTCGGTGA CGGTGACCGC CAATATCGAG
GTGCACGTCC ACCCGATGGA CCCGGTCAGC GGGCGGCTGC TGGCGCTCGG CGCGATGCCG
TCGCTCGGCA TCGACAGCGT CCCGCTGGCG AACAGCGACT TCTTCAACGA GATGCGCCTC
GCCATGCTCT ACCAACGCGC GCTCGACCAG CGCGTCGCCT GGCGGAACGG GGCGCCGCCG
CCCGACCGTC TGCCGGTTCC GCCCCGGCAG GTGCTCGAAT GGGCGACGAT CGGCGGCGCC
CGCGCGCTGT GCATGGAGGA TCGGATCGGC AGCCTGACGC CCGGCAAGAA GGCCGACGTG
GTGCTGATCG ACGGGCTCGC GCTCAACATG TTCCCGGTGC ACGAGCCGAC CTTCAGCACG
GTGCAGCAGG CGAACGCCGC CAATGTCGAT ACGGTGCTGG TCGACGGCAT CGTGCGCAAG
CGGGGCGGCA AGCTGGTCTA TGCCGACGCT CTCCTCGCGC AGCGCCGCGA CGAGCTTTTG
CGATCGGTGT CGCGCATCAT CGCCGAATCC GGCTATCGTT CCTCGGCCAT CGGTTCGTGA
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| Protein sequence | MKRTLIRNGR VVTVDPALGD IDDCDILIVG DRIAEVRPAI DADADEVIDA RDKIVIPGLV
NAHLHTWQTG LRSIGSGWTG PDYHRIVHGN MGTRFLPDDN HVGTLLGALE QLSGGVTTIF
DWCHDITSID YAHRSIDALD EAGIRAVFGH GSAKPNAAPG ELPFTHIPHP RERVEALRNG
RLSSDDGLVT LAVAILGPQF SIPEVVEHDF RMVRDLGLPS SSHAARRPKD WVSPEGFHIP
ARLGLLDARH NVVHANYIGD EELKLIVDCG ASVTVTANIE VHVHPMDPVS GRLLALGAMP
SLGIDSVPLA NSDFFNEMRL AMLYQRALDQ RVAWRNGAPP PDRLPVPPRQ VLEWATIGGA
RALCMEDRIG SLTPGKKADV VLIDGLALNM FPVHEPTFST VQQANAANVD TVLVDGIVRK
RGGKLVYADA LLAQRRDELL RSVSRIIAES GYRSSAIGS
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