Gene Swit_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1778 
Symbol 
ID5200773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1993617 
End bp1993979 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content69% 
IMG OID640581325 
Productcupin 2 domain-containing protein 
Protein accessionYP_001262278 
Protein GI148554696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0617369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTCA CCCGCTTCGA CGCGGCCGAG GCCTATTTCC CGGCGGGGCA TGTCGACATG 
CGCTGCTACC GGCTACAGGG CCGCGACGAC GCGGTCGAGC CGGCGATGCT GCTCAACCTG
TGCCATTTCC TGCCCGGCGG ATCGACCGGC AGCGCGGCGT CCCCGGCCGA GAAGCTCTAC
CTCGTCCTGG AGGGCGAGCT GACCGTCTCC AGCGGCGGCC GGGAAGAGCT GCTCGGCCCC
TGGGATTCGT GCCGGATCGC CCCCGGCGAA GCGCGGCTGA TCGAGAACCG CAGCCATCGG
CCGGCCAGCA TATTGCTGGT CATGACCAAT GCCGACGCGG CGCCGAAAGG ACCAAGCGAC
TGA
 
Protein sequence
MKVTRFDAAE AYFPAGHVDM RCYRLQGRDD AVEPAMLLNL CHFLPGGSTG SAASPAEKLY 
LVLEGELTVS SGGREELLGP WDSCRIAPGE ARLIENRSHR PASILLVMTN ADAAPKGPSD