Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1778 |
Symbol | |
ID | 5200773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1993617 |
End bp | 1993979 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640581325 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001262278 |
Protein GI | 148554696 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0617369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGTCA CCCGCTTCGA CGCGGCCGAG GCCTATTTCC CGGCGGGGCA TGTCGACATG CGCTGCTACC GGCTACAGGG CCGCGACGAC GCGGTCGAGC CGGCGATGCT GCTCAACCTG TGCCATTTCC TGCCCGGCGG ATCGACCGGC AGCGCGGCGT CCCCGGCCGA GAAGCTCTAC CTCGTCCTGG AGGGCGAGCT GACCGTCTCC AGCGGCGGCC GGGAAGAGCT GCTCGGCCCC TGGGATTCGT GCCGGATCGC CCCCGGCGAA GCGCGGCTGA TCGAGAACCG CAGCCATCGG CCGGCCAGCA TATTGCTGGT CATGACCAAT GCCGACGCGG CGCCGAAAGG ACCAAGCGAC TGA
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Protein sequence | MKVTRFDAAE AYFPAGHVDM RCYRLQGRDD AVEPAMLLNL CHFLPGGSTG SAASPAEKLY LVLEGELTVS SGGREELLGP WDSCRIAPGE ARLIENRSHR PASILLVMTN ADAAPKGPSD
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