| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1776 |
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| Symbol | |
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| ID | 5200771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1990030 |
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| End bp | 1992234 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581323 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001262276 |
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| Protein GI | 148554694 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00365566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAGC TGACATTGAA CGCGGTATCG ACCTTGGCTT TGATCGCGTC CTGCTCGCTG
GCGACGCCGC TGTGGGCGGC GAAGGAAGGC GGTGCGGCCG ATGCGGTCGA GGAGATCATC
GTCACCGCGC AGCGGACCAG CCAGAGCTCG CAGAAGGTGC CGCTCGCGAT CACCGCGCTG
AGCGGGGATT TCCTGGAGAA GTCGAACGTC CAGGGGTTCA ACGACCTGCG CACCCGCGCG
CCGAGCCTGA CCTATGACGA GTTCGCGCCG GGCCAGCCGC GCTACTCGAT CCGCGGCATC
GGCAACACCA ACAAGTCGTC GGGCGTCGAT CCGGGCGTCG CGCTGTTCGT CGACGACGTC
TATATGGGCC GCCCGGCGAT GACCTCGACC GACTTCAGCG ATCTCGACCG GGTCGAGATA
TTGCGCGGGC CGCAGGGCAC GCTGTTCGGC CGCAACGCGA CCGGCGGCGC GATCTCCTTC
TTCACGCGCC GGCCCGACGA TCGCTTCGGC TTCGAGGCGA AGGCGACGGC CGGCAATTAC
GACCTGTTCA GCGGCAGCGT CCTGCTCACC GGCCCGCTGT CAGAGACGTT GTCCGGCAAG
ATCACCGTCT CGGCGCGCCG GCACGACGGC TATGCCTATA ACGAGACGAC CCGCAACGAC
ATCGAGGACG AGCGCTATAT CGGCGCCCGC GCCGCGCTGC GCTGGCAGCC CAACGACGCC
TGGGACATCC AGCTCAACGT CGACGGTTCG CGGCGGCGCG GCACCGGACC CTGGTGGGAC
CTCGCGGTCG AGGGCGCCGG CTCGATCGGC AAGTCCAACC CCAATCCGCG TCGCGGCAAG
AATTATCCCG ACGACGGCTA TGCCGACATC GACAATTACG GCGTCAGCCT GAACAGCGTC
TGGACCGGGG ATATCGGCAC GATCACCTCG ATCACCGCCT GGCGCCATTC GCAGAACGAC
AATCGCGCCA ACAGCACCGG GCTCAACGTG CTGCCGCTCA CCGATCCGAA CCGGGGCAGC
CTCTACCACA CGCTGTTCAT CCAGCAGGAC AATGAGAAGG CGCGGCAATT CTCGCAGGAG
ATCCGCCTGG CCTCGCAGAT CGGCGACCGG TTCCGGCTCA TCACCGGCGC CTTCTTCTAC
CATGACAATG TCGATCACCT CCGGCTGACC GACTATGAGT TCGTCAATTT CGGTCCGGGC
CTGGCCGGGC GCTACCAGTT CGACGCGAAC AACAAGACGA CCGGCTATGC TCTGTTCGCC
AACGGCACCT ATGAGCTGAC CGACCAGCTC AGCCTGGAGG CGGGCATCCG CTGGAGCCAC
GACCGCAAGA AGCATGTCGT GACCGGCTCG GGCGCCAATT ATTCGCGCTT CCGCGACAAT
GGCGTGACCG TTCCCGGCTA TACCGCGCCG GCCAGCGCGA GCTGGAGCGC GGCGACGCCG
ATGGTGTCGC TCAAATATCA GATCCAGCCC GCGGTCATGA TGTACGGGAC GATCTCGCGC
GGCTTCAAGA GCGGCGGCTT CAACGACACC GACAACGACC GGGTCTCGGC GCTGCGGCCG
TTCAATCCCG AATATGTCTG GAACTATGAG GTCGGGCTCA AGTCGGAATG GTTCAACCGC
CGGCTCCAGT TCAACGCCGC GACCTTCTAC ATGCGCTACA CCGATCTGCA GGTGTCGATC
CTGACCAGCG TCGATCCGGC CCTGCCGGCG GTTCCGGTCA ACGGCAATGC CGGCAAGACG
ACGATCAAGG GCGCCGAGCT CGAGCTGACC GCGGTGCCGG TGCGCGGCTG GAACATCTAT
GCCAACTACA CCTACACCGA CGGCAAGATC AAAGAGCTCA ACACCGGTAG CGTCGACTAT
GCCGGCAATC GCCTGCCGCG CGTGCCGAAG CACAAATATT TCATCGGCAC GAGCATCAGC
CAGCCGGTCG GCGATCTCAC GGTCACCGGT CGCGTCGACT ATAGCTACCA GACCTCCTAC
TACGCCTCGA TCCAGAACCT CGTGACCGAG CGCTCGCTCA AGCAGAAGAA TCTCGACGCG
GGCGTGACGA TCGACCTGCC CGGCGATCGC TGGAGCGTCG AGCTGTGGGG CAAGAACCTG
ACCAATGAGC TGAACATCAA CTCGGTCACC GACGTGCTCG GCGATGCCTT CGCCACCTAC
ACGCCGCCGC GGACCTACGG CGCGACGGTC AAGTTCCGCT ACTGA
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| Protein sequence | MRQLTLNAVS TLALIASCSL ATPLWAAKEG GAADAVEEII VTAQRTSQSS QKVPLAITAL
SGDFLEKSNV QGFNDLRTRA PSLTYDEFAP GQPRYSIRGI GNTNKSSGVD PGVALFVDDV
YMGRPAMTST DFSDLDRVEI LRGPQGTLFG RNATGGAISF FTRRPDDRFG FEAKATAGNY
DLFSGSVLLT GPLSETLSGK ITVSARRHDG YAYNETTRND IEDERYIGAR AALRWQPNDA
WDIQLNVDGS RRRGTGPWWD LAVEGAGSIG KSNPNPRRGK NYPDDGYADI DNYGVSLNSV
WTGDIGTITS ITAWRHSQND NRANSTGLNV LPLTDPNRGS LYHTLFIQQD NEKARQFSQE
IRLASQIGDR FRLITGAFFY HDNVDHLRLT DYEFVNFGPG LAGRYQFDAN NKTTGYALFA
NGTYELTDQL SLEAGIRWSH DRKKHVVTGS GANYSRFRDN GVTVPGYTAP ASASWSAATP
MVSLKYQIQP AVMMYGTISR GFKSGGFNDT DNDRVSALRP FNPEYVWNYE VGLKSEWFNR
RLQFNAATFY MRYTDLQVSI LTSVDPALPA VPVNGNAGKT TIKGAELELT AVPVRGWNIY
ANYTYTDGKI KELNTGSVDY AGNRLPRVPK HKYFIGTSIS QPVGDLTVTG RVDYSYQTSY
YASIQNLVTE RSLKQKNLDA GVTIDLPGDR WSVELWGKNL TNELNINSVT DVLGDAFATY
TPPRTYGATV KFRY
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