Gene Swit_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1769 
Symbol 
ID5200558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1979487 
End bp1979906 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content72% 
IMG OID640581316 
Producthypothetical protein 
Protein accessionYP_001262269 
Protein GI148554687 
COG category 
COG ID 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGG CCGCGCCGGA CCTCGCCGCG ATCGCCGACA AGATCGCGCT GGGTGAGCTG 
GTGGCGCGCT ATGCCTGGCT GGTCGGTCAG GGGCGCGGCG CCGAGGTGCC CGCGCTGTTC
ACCGCCGACG GCGCGTTCGA GGGGCGCAAC CAGCAGCTGC GGGGGCGGGA GGAACTGGCG
CGCTTCTATG CCCGGTCGGC GAGCGGCCAT GGCGAGGTGG TGCCGCTGGT CGGCAACATG
ATCTTCGACC TGGCCGGCGA CCGGGCGACC GGGGTCTCGA CCCTGACCGG CCACAAGCGC
GGCAGCGGCG TCCATGTGTT CAGCGGCGTC TATGAGGATG ATTTCGCCCG CGTCGACGGG
CGCTGGCTGT TCGATCGGCG GCGCTTCACC ACCTATTTCG ACCTGCGGGC GGCTGGCTGA
 
Protein sequence
MSGAAPDLAA IADKIALGEL VARYAWLVGQ GRGAEVPALF TADGAFEGRN QQLRGREELA 
RFYARSASGH GEVVPLVGNM IFDLAGDRAT GVSTLTGHKR GSGVHVFSGV YEDDFARVDG
RWLFDRRRFT TYFDLRAAG