| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1763 |
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| Symbol | |
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| ID | 5198508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1972552 |
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| End bp | 1974090 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581310 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001262263 |
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| Protein GI | 148554681 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCGA GCATCCACGC GGTCGCGAAC GGGGACAAGC CGGCCTTCAT CACCGCCGAG
ACCGGCGAGG TCGTCACCTA TCGGCAGCTC GACCGGCGCT CCAACCAGGG CGCGCACCTC
TTCCGCCAGG CCGGCCTGCA AACCGGCGAC ATGGTCGCGC TGTTCCTGAC CAACGGGCCG
CGCTTCCTGG AGACGGTGTG GGCCGCGCAG CGCTCGGGGC TCTATTATGT CTGCATGCCG
GTGCGGCTGA CCGCCTCCGA GCTTCGCTAC ATGATCGAGG ATGCGGGCGC CAAGGCGCTG
GTCTTCTCCG CCGGCCTCGC CGACACGGTG CGCGAGGCGG TCGACGGCCT CGGCGATCTG
GCGCTGTTCG CCACCGACGG CGAGGCCGGT TTCGCGCGGA GCTTCGAACG GCTCCGCGAC
GCGATGCCCG ACACGCCGAT CGCCGACGAG GCGCCGGGCC AGGACATGCT CTATTCGTCG
GGCACCACCG GCCATCCCAA GGGCATCAAG CGCCCCCGCC CGGCCGGCGG CATCGACGAG
CCGACCCCGG TGACCAACCT CGCCCGCACC CTCTACGGCA TGGACGCGGA CAGCATCTAT
CTCTGTCCCG CGCCGCTCTA TCATTCGGCG CCGCTGCGCT ATTCGATGTC GGTCAACCAG
CTCGGCGGCA CCGTGATCGT GATGACGAAG TTCGATCCGG AGGAGGCGCT GCGGCTGATC
GAGCGGCACC GCGTCACCCA TGCGCAATGG GTGCCGACCC ATTTCGTGCG GATGCTGAAG
CTGCCCGAGG CGGTCCGCGA GCGCTACGAC CATTCGTCGC TGCGCAGCAC CTTCCACGCC
GCGGCGCCCT GCCCGGTCGA GATCAAGCAG GCGATGATCG ACTGGTGGGG GCCGATCGTC
CACGAATATT ATTCGAGCAC CGAGCTGAAC GGCTTCACCG CCGCGACGGC GGAGGAATGG
CTGGCCCACA AGGGCACGGT CGGCCGCGCG ATCATCGGCG AGATCCGCAT CTGCGACGAG
AATGACGATC CGCTGCCGCC GCGCCGCGAG GGGATGGTCT ATTTCGAGAA GGGCAACCCG
ATCGAATATC ACAACGATCC GGAGAAGACC GCCGCGGCCT ATAACCGCCA TGGCTGGACC
TCGGTGGGCG ACATCGGCTG GGTCGACGAG GAGGGCTATC TCTACCTCAC CGACCGGCAG
AGCTTCATGA TCATCTCGGG CGGGGTCAAC ATCTACCCGC AGGAGATCGA GAACCTGCTG
GTCACCCATC CGCGTGTCGC CGATGCGGCG GTGATCGGCG CGCCCGATCC CGATCTCGGC
GAGCGGGTGG TCGCGGTGGT GCAGCCGCTC GACTGGTCCG ACGCCGGCGA CGCGCTGGCC
GCCGAGCTGG ACACCTTCCT ACGGAAGGGC CTGAGCCCGG TGAAGATGCC CAAGCGGATC
GAGTTCATGC GCGAGCTGCC GCGCCAGCCG ACCGGCAAAT TGTTCAAGCG GCTGATCCGC
GACCGCTTCC GCGAAGCCGC CGCCGCGCCC GCCGCCTGA
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| Protein sequence | MHPSIHAVAN GDKPAFITAE TGEVVTYRQL DRRSNQGAHL FRQAGLQTGD MVALFLTNGP
RFLETVWAAQ RSGLYYVCMP VRLTASELRY MIEDAGAKAL VFSAGLADTV REAVDGLGDL
ALFATDGEAG FARSFERLRD AMPDTPIADE APGQDMLYSS GTTGHPKGIK RPRPAGGIDE
PTPVTNLART LYGMDADSIY LCPAPLYHSA PLRYSMSVNQ LGGTVIVMTK FDPEEALRLI
ERHRVTHAQW VPTHFVRMLK LPEAVRERYD HSSLRSTFHA AAPCPVEIKQ AMIDWWGPIV
HEYYSSTELN GFTAATAEEW LAHKGTVGRA IIGEIRICDE NDDPLPPRRE GMVYFEKGNP
IEYHNDPEKT AAAYNRHGWT SVGDIGWVDE EGYLYLTDRQ SFMIISGGVN IYPQEIENLL
VTHPRVADAA VIGAPDPDLG ERVVAVVQPL DWSDAGDALA AELDTFLRKG LSPVKMPKRI
EFMRELPRQP TGKLFKRLIR DRFREAAAAP AA
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