| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1746 |
|---|
| Symbol | |
|---|
| ID | 5198502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1953615 |
|---|
| End bp | 1954400 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640581294 |
|---|
| Product | short chain enoyl-CoA hydratase |
|---|
| Protein accession | YP_001262247 |
|---|
| Protein GI | 148554665 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA GCGAGCCGCC GCAGCCGGAG ATCGACAGCC ACGCCGAGGA CGGCGTCGGC
TGGATCCGGC TGCGGCGGCC GCCGCTCAAC ATCATCTCCA CGCGGATGGC CGACGACGTC
GCCGACGCGG TCGCGCGCTT CGACGCCGAC CCCGCCGTCA GGATCATCGT CGTCGCCTCC
GCGCTCGACC GCGCCTTCGC GGCGGGCAGC GACGTGGGCG AGCATGACCT CGCCCACGTC
CACGACCATA GCCGCGCGAT CTTCCGCATG GTGCGCTCGC TCGCCGCCGT CGACGGCAAG
CCCAGGATCG CCGCGATCAA CGGCATCTGC TCGGGCGGCG GCAACGAGCT CGCCTTCGCC
TGCGACATGG TGATCGCCTG CGAGGACACG CGGCTGGCCC TTCCCGAGAT CGACATCGGC
GTGGTCAGCG TGCTCGCCGC CTTGCTGATG GCGCATCATG TCGGCCAGAC GAAACTGCTC
GATCTCGCCT TCTCGGGCCG ATGGATCGAC GCCGCCGAGG CCGAGCGCAT CGGCCTGACC
GTCAGGACCC TGCCGCGCGC CGGCTTCGAC GCCGACCTGC GCGAGCATCT GCGGACCTTC
ACCGCCAAGA GCGGCCCGGC GCTGCGGATC GGACGGCGCC TGCTGTTGTC GGCGCTCGGC
CGCGCCGACC TCGACGCGCG CCTCGACGCG CTGGAGCGCG GCATCGTCGA AGAGGCGATC
GCCATCCCCG ATTATGCCGA GGGCGTCGCC GCCTTCCTGG AAAAGCGCAA GCCGAGCTGG
CGCTGA
|
|---|
| Protein sequence | MTDSEPPQPE IDSHAEDGVG WIRLRRPPLN IISTRMADDV ADAVARFDAD PAVRIIVVAS
ALDRAFAAGS DVGEHDLAHV HDHSRAIFRM VRSLAAVDGK PRIAAINGIC SGGGNELAFA
CDMVIACEDT RLALPEIDIG VVSVLAALLM AHHVGQTKLL DLAFSGRWID AAEAERIGLT
VRTLPRAGFD ADLREHLRTF TAKSGPALRI GRRLLLSALG RADLDARLDA LERGIVEEAI
AIPDYAEGVA AFLEKRKPSW R
|
|---|
| |