| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1732 |
|---|
| Symbol | |
|---|
| ID | 5198172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1937818 |
|---|
| End bp | 1938438 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640581280 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001262233 |
|---|
| Protein GI | 148554651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGGCAG CCGCGCGGAG CCTGTTCGCC GAACGCGGGA TCGAAGGCAC CACCGTCCGC
GATATCCTGA CGGTCGCCGG CGAGAAGAAC GGGGCGTCGC TCAACTATTA TTTCCGCTCG
AAGGAAGAGC TGATCCGCGA GCTGACCGTC GACGTGTTCC GGCTGATGGA CGATCGCTGG
AACGCGCAGC TCGCCGAGCT CGACCGCCAG GGCCGGCCGC TGGACATCAG GGATTATGTC
CGCATCCTCG TGACCTCGTC GGACACGAGC GACGTCGAGG ACGAGCCGAC CACCGCCCGG
CTTTCGGAAG CGATCACGCA TCACCGCTAC CATCTGGTCC GCGAGATCCT CAAGGAACAC
CGGCTCAACG CCTATGACGT GATCCTGGGC CGGATCGCCG CGCTGATGGA GGACATGCCG
CGGCCGATCC TGCGGCAGCG GCTGCTGCTG CTCACCCGCT ATCTCTCGTC GGTGTTCGCG
CTCTACGAGG CGAGCCGCGC CTCCAACGCG CAGCCCCGCT CGGTGCAGCT TCCCCAGGGC
GCCGATCTCG GCAACCTCGT GGACACGGCG GTGGGCATTT TGACCGCCCC GGTGGTCGAC
GCCGACCCCG GCGAAGGCTG A
|
|---|
| Protein sequence | MKAAARSLFA ERGIEGTTVR DILTVAGEKN GASLNYYFRS KEELIRELTV DVFRLMDDRW
NAQLAELDRQ GRPLDIRDYV RILVTSSDTS DVEDEPTTAR LSEAITHHRY HLVREILKEH
RLNAYDVILG RIAALMEDMP RPILRQRLLL LTRYLSSVFA LYEASRASNA QPRSVQLPQG
ADLGNLVDTA VGILTAPVVD ADPGEG
|
|---|
| |