| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1725 |
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| Symbol | |
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| ID | 5196585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1928960 |
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| End bp | 1929940 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581273 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001262226 |
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| Protein GI | 148554644 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTAT GGAATTATGT TGGTGGTGAC CCGGCACCGC AAACGAGGCT TTGGACAAAG
TTGGTTCCGA GATGGAATGA TATGACCCCT CGACGCTTCC TTCCCCCCAC CGCCCTGCTC
TGCGCCTTCG ACGCCGCCGC CCGGCATCAG AGCTTCACCG CCGCCGCGCG CGAGCTCGCG
CTCACGCAGA GCGCGGTCAG CCGGCAAATC CGCGCGCTCG AGGAACTGCT CGGATCGGAG
CTGTTCCATC GCGAGAAGCA GAAGGTGAAG CTGACCCTGG CGGGCAACGC CTATGCGCGG
GAGATTCGCG GCGCCCTCGC GCGCATCTCC AGCGCGACGC TCGGTTTCCG GGCCAATCCC
GGCGGCGCGT CGCTGCACCT GGCCCTGCTG CCGATGTTCG GCCTGCGCTG GCTGATGCCG
CGCCTGCCCG GCTTCCTGGC GGCGCATCCG GACATCACCG TCCATGTCTC GACGCGAACC
ACGCCGTTCG ACTTCCGGAC CGAGACGATC GACGCGGCGA TCCATTTCGG CGAAGGCGAA
TGGGCTGGCG CGCAGCTCGA CCGGCTGATG GGCGAGACGG TCGCGCCGCT GTGCAGCCCG
GCGCTCCGCG CGCGGCTCGG CGCGGCGAAG CCCGCCGACC TGATCGAGGC CCCGCTCCTC
CACCTGATGT CGCGGCCCGA TGCCTGGGAA CGCTGGTTCG CGGCGATGGA GGTCGACCCG
GGCGAGGTCC ATGGCATGCT GCTCGACCAG TTCCTGCTGG TCGCCGAAGC CGCCCGCGCG
GGCCTGGGCG TCGCCCTGCT GCCGGAGTTC CTCGTCGAGG CGGAGCTGCG CAGCGGCGAT
CTCGTCAGGG CGCTCGACGC CCCCGTCGTC CAAGCCGACC ATTATTATCT CGTCTGGCCC
CATACCCACG AACGCCACCC GCCGCTGGAC GCCTTCCGGA CCTGGATCCT CCAGGAAGCT
CGAAAGGAAT CGGGGCGATG A
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| Protein sequence | MQLWNYVGGD PAPQTRLWTK LVPRWNDMTP RRFLPPTALL CAFDAAARHQ SFTAAARELA
LTQSAVSRQI RALEELLGSE LFHREKQKVK LTLAGNAYAR EIRGALARIS SATLGFRANP
GGASLHLALL PMFGLRWLMP RLPGFLAAHP DITVHVSTRT TPFDFRTETI DAAIHFGEGE
WAGAQLDRLM GETVAPLCSP ALRARLGAAK PADLIEAPLL HLMSRPDAWE RWFAAMEVDP
GEVHGMLLDQ FLLVAEAARA GLGVALLPEF LVEAELRSGD LVRALDAPVV QADHYYLVWP
HTHERHPPLD AFRTWILQEA RKESGR
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