Gene Swit_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1720 
Symbol 
ID5197958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1922707 
End bp1922991 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content73% 
IMG OID640581268 
Productcupin 2 domain-containing protein 
Protein accessionYP_001262221 
Protein GI148554639 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCCG CCGATGCGGT CCACGCGCTC GGCGCCGATG CGCCGGGATG CCGGGCGCTG 
GTGTCGAGCT TCGCCGCCGG GCTGCGCGTC CCGGCCGAGG GCAGCAGCCG GCATGACGAG
ATCGAGATAT CGCTGGTGCT GTCCGGCGCG TTCGACCTCG ACAGCGGCGG CGAGGTCGCG
CGGCTCGCGG CGGGCGACGT CGTGATCGTG CCGCCGGGGG AGGCGCATTC CTTCCAGGTC
GTCGCCGACA CGCGGATTTT CACGGTTACC GTCGCCGCCG GCTGA
 
Protein sequence
MLAADAVHAL GADAPGCRAL VSSFAAGLRV PAEGSSRHDE IEISLVLSGA FDLDSGGEVA 
RLAAGDVVIV PPGEAHSFQV VADTRIFTVT VAAG