| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1661 |
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| Symbol | |
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| ID | 5200383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1848434 |
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| End bp | 1849204 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581209 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262162 |
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| Protein GI | 148554580 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.1817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG CCAGAGTCGT GCTGGTGACG GGCGGCGCCT CCGGGATCGG CGCGGCGACC
GTGCGCCATT TCATCGCGCA GGGCTGGAAC GTCGTCGTCA ACTATTTCAT GGAACGCGAG
GCGGAAGCAG CCGAAGCGCT GGTCGAGGAG GCGGTCTCCG CCGGCCTGCG GGGCCTGGCG
GTGCGCGGCG ACGTCGGCCG CGACGAGGAT TGTCGGCGCA TGGCCGAGGC GGCCATGGCC
CGCTTCGGCC GGATCGACGG GCTGGTCAGC AGCGCCGGCG CGTCCCGGAT GGTGCCGCAG
CACGATCTCG ACGCCCTCAC CCTCGACGAT TTCCTCCACA GCACGACCGT CAACACCGCC
GGTCCGTTCC AGATCGCCCG CGCCTGCGCC CCTGCACTGC GCGCCGCCAG GGGGGCCGTG
GTGATCGTTT CTTCCTATGG CGGAATCACC GGAACGGGAT CGTCGATCGC CTATGCCGCG
TCCAAGGGCG CGACCAACAC GCTGACCCTT TCGCTCGCGC GCGTGCTGGC GCCCGAGATC
CGGGTCAACG CCGTCTGCCC CGCGCTCGTC GCCGACGGCT TCGTCCAGCG GCTCGATCCC
GACCTGTTCG AACGGCGCGC GGCGACCCAG CGCGACCGGT CTCCGCTGAA GAGGATCGGC
CATGCCGCCG ACGTCGCCGC CGACATCCAC TGGCTGGTCG CCGGAGCGTC GCTGATGACC
GGCGCGGTGC TGATGCTCGA CGCCGGGCTC CATCTCAACA TGGACGGCTG A
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| Protein sequence | MTDARVVLVT GGASGIGAAT VRHFIAQGWN VVVNYFMERE AEAAEALVEE AVSAGLRGLA
VRGDVGRDED CRRMAEAAMA RFGRIDGLVS SAGASRMVPQ HDLDALTLDD FLHSTTVNTA
GPFQIARACA PALRAARGAV VIVSSYGGIT GTGSSIAYAA SKGATNTLTL SLARVLAPEI
RVNAVCPALV ADGFVQRLDP DLFERRAATQ RDRSPLKRIG HAADVAADIH WLVAGASLMT
GAVLMLDAGL HLNMDG
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