Gene Swit_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1645 
Symbol 
ID5198441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1830162 
End bp1831007 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID640581193 
Productmethyltransferase type 11 
Protein accessionYP_001262146 
Protein GI148554564 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0736316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGA CCGAAGCCGT TGCGCCCCTG TGGGACTTTG TAGGGCATTA TGTCGGACGC 
TTCTCGGTCG CGCCAGATTT CGGCGCCCTC GGACAATATG AGTTCATCGG CGAGGCGCTG
CTTCCGATCG CGCAGATGAT CGTCGACACT GCCGCGATCA AGCCGGGCGA AGCCGTGCTC
GACGTCGGCG CGCGGAACAA TGCCGCGCTG CTGGCCGCCC AGGCCGGCGC GAAGGTCACC
GCGATCGAGG TCTCGCCCCG CCTGCTCGAC GTCGCGCGGG AGAGACTGAA GGATTTTCCC
GATACCCGCT TCGAGCTTGC CGACGTCGCG AAGCTTCCCT TTCCGGACGC CAGCTTCGAT
GCGGTGATCG ATGCGGTGAG CCTGATGTTC GGGGCGGACC GCGAGGCGGC GGTCGCTGAG
ATGGCCCGGG TGCTGAAGCC GGGCGGGCGC ATCGTGTGGA CCGGCTGGTT CGGCGGCGAC
GCGATCTCGG ACGTGGCGAA GATCCAGATC AACGACACCG CGGCCGTCGT CGGCCAGGCG
CCGTTCCCCT ACAGCTATTG GGGCAATGAG GACGAGATGC GCGCGCTGTT CGGCGCGCGG
GGTTTCGATA TCGTCCTGAC CAAGCATCCG ATGGTCAACA CCGGCCCCGC GCCGCGCACC
TTCCTCGAGG GGCTCGACCA GGTCCATCCG GTGTCGCGCG GCTGCAGCCT GGCGCTCGAG
AAGGCCGGCC TCTTCGAACG GACGATGACC CGGATGGTCG AGGCGATCGA GCGCCGCAAC
GAGGACAGCG AGGGCACGAA GATCAGCCGG CACTATGTCG TCGGTGTGGC GACGCGGAAG
GCCTGA
 
Protein sequence
MSTTEAVAPL WDFVGHYVGR FSVAPDFGAL GQYEFIGEAL LPIAQMIVDT AAIKPGEAVL 
DVGARNNAAL LAAQAGAKVT AIEVSPRLLD VARERLKDFP DTRFELADVA KLPFPDASFD
AVIDAVSLMF GADREAAVAE MARVLKPGGR IVWTGWFGGD AISDVAKIQI NDTAAVVGQA
PFPYSYWGNE DEMRALFGAR GFDIVLTKHP MVNTGPAPRT FLEGLDQVHP VSRGCSLALE
KAGLFERTMT RMVEAIERRN EDSEGTKISR HYVVGVATRK A