| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1610 |
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| Symbol | |
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| ID | 5199474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1791327 |
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| End bp | 1792601 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640581158 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001262111 |
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| Protein GI | 148554529 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCC CCAAGGAAAA ACGCCCGACA AAGCCCATTG CGACGGCCGG CAAGAAGGCG
ACGGCGCGAG TTGGCGGAAA GTCCACGCAG CGGTTCGAGG CCAAACGCGA CGCCATTATT
TCGGCCGGTT CCGAGCTCAT CAATCGCGAA GGCGTGAAGG GGATGACGCT CGCCGGCGTT
GCCGAGCGGG TCGGACTTTC GACGACGAGC GTGACCTACT ATTTCAAGCT CAAGGAAGAC
CTTGCCGTTG CCTGCATCCT GCGCGGCATC GAACAGCTCG AGCAACTGAT CCTGGGTGCG
AGCGGAGACA CCCCACCCGC ACGGATCGCC AGCTTCCTGA CCGCCTATTT CGATCTGGCC
GCGCGGATCG CAAACGGGTT GGAACCACCC TTCTGCGTGT TCAATGATAT TCGTGCGCTG
AGCAAGCCGA ACGCGGCGAC CTTGCTGCGC GCGCACAATC GCATGCTGGC CCATATGCGC
GGTTTCTTCT GGATCGGTTC GACGCCACCG GAACTCGAGC AGGTTCTGAA CATCCGGACG
CTTCTGCTCG CGGCCGCGCT ATATTGGACG CCGCTTTGGA CGCGTCAGTA TGATACGGAG
GATTATCCGC GCATATGCGC GCGGATGATC GACATCCTGC TGAACGGCAT AGCCCCCGAC
AAGAAGGCGA CGTGGAATCC CGCCCAGCTG CACTTTCGCT TCGAGAATGA GCCGGATCAG
AAAGAGCAGT TTCTTATCGC AGCCACCCAG TTGATCAACG AACAGGGCTA TCACGGCGCG
TCGATCGACA AGATCTCTGC ACGGCTCGAT CTCACCAAGG GCTCCTTCTA TCACCATCTC
GACACCAAGG ACGACCTGGT GGCGATGTGC TTCCAACGTA CGTTCGGCGT GATCGCGGCG
GCGCAGCGCT CGGCCATGGC CCAAAAGGGC AACGGGTGGA TGAAGCTGAC CTCGGCCTGC
GCCGCGCTCA TGCAGTTCCA GTTTTCCAAT GCGGGCCCGC TTCTCGAATT TGCCGCATTC
TCCGCGCTTC CATCGACGAT GGTCAACACG ACCGTGCAGC TTTCGGGCCG GGTGCCGCAC
CGCTTTTCCG AGATGATCTC CGATGGGATT ATCGACGGAT CCGTTCGCCC GGTAGATGCC
TATATCGCCG CACAGATCAT AACCGCGGCC ATCGTCTCCG CTCCCGAATT CGTTCACACG
GTATCGGTCC AGACCGCGGA CGAGGCCATT GCCCTTCTGC TGCAACCGAT CTTTTCGGGG
TTGCTCAAAC TGTAG
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| Protein sequence | MNFPKEKRPT KPIATAGKKA TARVGGKSTQ RFEAKRDAII SAGSELINRE GVKGMTLAGV
AERVGLSTTS VTYYFKLKED LAVACILRGI EQLEQLILGA SGDTPPARIA SFLTAYFDLA
ARIANGLEPP FCVFNDIRAL SKPNAATLLR AHNRMLAHMR GFFWIGSTPP ELEQVLNIRT
LLLAAALYWT PLWTRQYDTE DYPRICARMI DILLNGIAPD KKATWNPAQL HFRFENEPDQ
KEQFLIAATQ LINEQGYHGA SIDKISARLD LTKGSFYHHL DTKDDLVAMC FQRTFGVIAA
AQRSAMAQKG NGWMKLTSAC AALMQFQFSN AGPLLEFAAF SALPSTMVNT TVQLSGRVPH
RFSEMISDGI IDGSVRPVDA YIAAQIITAA IVSAPEFVHT VSVQTADEAI ALLLQPIFSG
LLKL
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