| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1582 |
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| Symbol | |
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| ID | 5199697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1759691 |
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| End bp | 1761292 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581130 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001262083 |
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| Protein GI | 148554501 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGGG ATTACATCAT CGTCGGCGGC GGGTCCGCGG GCTGCGTTCT GGCCAACCGG
CTGTCCGCCG ACCCCGGCCG GCGCGTCCTG CTGCTCGAAG CGGGCGGCTG GGACTGGTCG
CCGGTGGTGC GCGTGCCTGC CGGCGAGGTG CTGGCGATCA TGAGCCCCAG ATATAATTGG
CGCTATATGG CCGAGCCCGA TCCGTCGCGC GGCGGCCGCG CCGACATGTG GCCGGCGGGC
AGGGTGCTGG GCGGCGGCAG CTCGATCAAT GGCATGATGT ATGTCCGCGG CAATGCTGGC
GACTATGATC ATTGGGCGCG GCTCGGCAAC GAAGGCTGGG ACTATGAATC GGTCCTGCCC
TATTTCCGGC GGGCCGAACG CAACGAGAAT GGCGGCGATG CCTTTCGCGG CGGGGAAGGG
CCGCTATGGG TGTCGAACAG CCGGGCGCCG CACCCCCTGA CCCAGGTCTT CATCGACGCG
GGCGTGGAGG TCGGCATCCC CGCCAATCCC GATACCAACG GCGCGGTCCA GGAAGGGATC
GGACCGGTCC AGGCGACCCA GCGCAAGGGA TGGCGGCACA GCACGGCCCG CGCCTATCTG
GCGTCGGCCG CCCGTCGCCG CAACCTGACC GTGCGGACCG GCGCGATCGC CACCCGCCTG
CTGTTCGACG GCGATCGGGC GAGCGGCGTC GCCTATGTCC AGGGCGGACG CGAGTGCCGC
GAATATTGCC GGGGCGAGGT CGTCCTCAGC GCGGGCGCGA TCGCCAGCCC CAAGCTGCTG
ATGCTGTCCG GGATCGGCGA CGGCGATGCG CTCGACGCGC TCGGCATCGA GTGCCGGGTC
GATCGCCCGG CGGTCGGCGG CAACCTTCAG GAACATCCCG GCGTGATCAT GACGATGCAC
GTCAACGTCC CGACCTTCAA CGTCGAGAAG ACGCCGCTCA GGGCGATCCG CCACGCGCTC
GCCTTCCTGC TGGCGGGGCG CGGGCCCGGC ACGTCGTCGA TCGGCCATGC GGCGGCGTTC
GTGCGGATCG CGGAAGACGC CGACTATCCC GACATCCAGA TATCCTACTC GCCGATCACC
TATGATTTCG GGCCGGACGG GCTGAAGCTC TACGAGAGGC CCGCGATCGG CGCGGCGGTC
AATGTCTGCC GGCCGGAAAG CCGGGGCCGC CTGTCGCTGC GCTCGGCGGA CCCAATGATC
GCGCCGCGGA TTGAGCATGC CCTGCTCGGA TCGGCGAAGG ACATGCGGCT GATGGTCGAG
GGCTGCCGCC TGCTCCGGCG CATCTTCGAG GCACCGGCCT TCGCGCCCTA CAGGATCGAC
GAGCGCAGTC CCGGCCCCGC CGTGCAGGAC GACGCGGAGT GGGAAGCATA TATTCGGCGC
GAGGCTTTCC TGATGTACCA TCCGGTCGGC ACCTGTCGCA TGGGCAACGA CCCCGACGCC
GTCGTCGATC CGCAATTGCG GGTCCGCGGC TTGGAGGGGG TCCGCATCGC GGATGCCTCG
ATCATGCCGA CTCTGCCGAG CGCAAACACC AATGCACCGA CGATCATGAT CGGAGAGAAG
GCTGCGGATA TGATGCTTTT CTGTCAGAGG GAAGCGAGAT AA
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| Protein sequence | MAWDYIIVGG GSAGCVLANR LSADPGRRVL LLEAGGWDWS PVVRVPAGEV LAIMSPRYNW
RYMAEPDPSR GGRADMWPAG RVLGGGSSIN GMMYVRGNAG DYDHWARLGN EGWDYESVLP
YFRRAERNEN GGDAFRGGEG PLWVSNSRAP HPLTQVFIDA GVEVGIPANP DTNGAVQEGI
GPVQATQRKG WRHSTARAYL ASAARRRNLT VRTGAIATRL LFDGDRASGV AYVQGGRECR
EYCRGEVVLS AGAIASPKLL MLSGIGDGDA LDALGIECRV DRPAVGGNLQ EHPGVIMTMH
VNVPTFNVEK TPLRAIRHAL AFLLAGRGPG TSSIGHAAAF VRIAEDADYP DIQISYSPIT
YDFGPDGLKL YERPAIGAAV NVCRPESRGR LSLRSADPMI APRIEHALLG SAKDMRLMVE
GCRLLRRIFE APAFAPYRID ERSPGPAVQD DAEWEAYIRR EAFLMYHPVG TCRMGNDPDA
VVDPQLRVRG LEGVRIADAS IMPTLPSANT NAPTIMIGEK AADMMLFCQR EAR
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