| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1550 |
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| Symbol | |
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| ID | 5197602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1724953 |
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| End bp | 1726014 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640581098 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001262051 |
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| Protein GI | 148554469 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.276626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0604744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGG TCGCCAAGCC AGCCGGGTAC GAACCGATCG CACGCAACTA TCCCTATAAT
TGCTGGTGGG TCGCCGCCTT TGCCGACGAG GTCGGCCGCG TGCCGCTGGG GCGCTGGCTG
CTCGACACGC CCGTCGTGCT CTATCGCACC CAGGGCGGCG AGGTCGTGGC GCTGGAAGAT
CGCTGCCCGC ACAGGCAGGC GCCGTTGTCG ATCGGCAAGC TGCAGGGCGA CGCGATCGAA
TGCGGCTATC ACGGCTTCCA GTTCGGGCGG GACGGGCGGT GCGTGCGGGT CCCGACGATG
GCCAGCCCTC CGCCCATATC GATCGAGACC TTTCCCGTAC GCGAGATCGG GCCGCTCGTT
TGGGTCTATC TCGGCGACAG CGCTTGCCTC GACGCGGTTC CGCCGCCCCC GACCATGGCC
TGGATGAGCG ATCCGTCCTT CGCCATACGA CAGGGCAAGA CCGAGATCGC GGCCAACTAC
CTGCTGCTCA AGGAGAATGT GCTCGACCTG ACCCATTTCG GCTATGTCCA TGCGGGCAGC
TTCGGAATCA CGAACGTCGT CGGCAAGCTG ACCGTGACGC GGACCGACGA CACGGTCGGC
TATGAGGAGA TATTCGACCC GGCCCCCCTT CCCGACGGCT TGTCGCACGC ATTCGGCATC
GCCCCCGGCA CGCCCTGGTC ACGCTCCACC AAAGGCGCCT TCCTGTCCCC CGCCGCGCAA
TATGGAAGCG CGTCCTTCGC GGACCCCAGG ACGCCCGAAA CGCCCAACGC CTCGCACCAG
TTCGCGCACT TCACCACGCC GATCGACCAT GAGCACATGC ACTATTTCTA CGTGTTCGGC
CGCGACTATG CGCGCGAGCC CGCTGCGATG GACCACTTCG CCGCGATGGT CGAAAAGGGG
TTCAAGGAAG ACGAGTTCGT CCTGGAGCAG GTGCAGGCGC TGATCAGCCG CCGGCCGCGA
CGAGGATCGA CCGGCGAGCG AAGCGTCAAG GCCGATGCCG CCGGTGTCGA GGCGCGCCGG
ATCATCGAAC GATGGATGCA ACGGGAAACC ATCCCCGCCT GA
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| Protein sequence | MAMVAKPAGY EPIARNYPYN CWWVAAFADE VGRVPLGRWL LDTPVVLYRT QGGEVVALED
RCPHRQAPLS IGKLQGDAIE CGYHGFQFGR DGRCVRVPTM ASPPPISIET FPVREIGPLV
WVYLGDSACL DAVPPPPTMA WMSDPSFAIR QGKTEIAANY LLLKENVLDL THFGYVHAGS
FGITNVVGKL TVTRTDDTVG YEEIFDPAPL PDGLSHAFGI APGTPWSRST KGAFLSPAAQ
YGSASFADPR TPETPNASHQ FAHFTTPIDH EHMHYFYVFG RDYAREPAAM DHFAAMVEKG
FKEDEFVLEQ VQALISRRPR RGSTGERSVK ADAAGVEARR IIERWMQRET IPA
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