| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1542 |
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| Symbol | |
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| ID | 5198558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1716266 |
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| End bp | 1717366 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581090 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001262043 |
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| Protein GI | 148554461 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0106115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000412121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTATCCGT TCGGCTTAGC AACCGCCTAT CCCAGAAACC GGTGGTACAT TGCCGCGCTC
TCGGCGGAGA TCACGCAGAC GCCGTTCGAG CGGATGCTGC TCGACGTGCC GGTGGCGCTG
TATCGAACCG AGGACGGACG CCCGGTCGCC ATGTACGGGC GCTGCCCGCA CCGCTTCTAT
CCGCTCGCGC TGGGGCGGGT GGAAGGCGAC GGCCTCGTTT GCGGCTATCA TGGCTTCAAG
TTCGCGGCCT CGGGCAAATG CGTCCGGATC CCGGCGCAGA ATAGCGGCGC CAATTTCGAG
CAGCCGACCT ATCCGCTGGA GGAGCGGGGC ACTTATACCT GGATCTGGAT GGGCGACCCG
AAGCTCGCCG ATCCGTCCTC CATTCCGCCC TATGAGGATT TCGGCCTGGA CCAGCCCGGC
TGGGCTGTTT CCGGCGGCTA TCGGCTGGAG ATCAACGGCC GTTCGCAATT GCTGATCGAC
AATCTGATGG ACCTGACGCA CCTGCCGCAC GTCCATCATC ATGTGCCGGG CGGCGATGCC
TATCTTCAGT CGCGGCACAC GCTGAGCGAG CGGCCGCGCT CGCTTCGCCT GACGCAGGAA
ATGCCCGGCA CCTGGTCGCC ATTCTTCGAA TTCCTCTGGG GCGCGGACCA GCGCTTCGAC
GGCGAGGTGA TGCTGCACCA GGTCACCGAT TTCTACGGAC CCGAGTTCGT GAAGACGAGC
GGGCCGCTGA TCGACTTCGC ACAGGACGGC GAAGGCCATC TCTCGACGAG CCACGGCATC
GTGTATTTTC TCCACGGCGT CACCCCGGCC ATGGCCCACA GCACCCATTT CTTCTGCGCC
CAGACGAGGA ACTTCCGCAT CGACGACGAT GCGTTCGGAC AGGCGCTGCA CGAGCTGGAC
GAGGTCATCC GCATGCAGGA CGTCGTGGCG ATCAACCATG TCGAGCCGGA CGTCGAACGA
TCCTCCCAGG TCCAGCGCGA GCTGCTGGCC CGATCCGACC GCGCCGCGGC GGCAGTACGC
GAGCGGATCA AGGAGATGAT CCTGGCCGAA CAGCCGTCCC AAGCTTCGGA ACCCGCCCCC
GCCAGGGACC TGGCCGGCTA A
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| Protein sequence | MYPFGLATAY PRNRWYIAAL SAEITQTPFE RMLLDVPVAL YRTEDGRPVA MYGRCPHRFY
PLALGRVEGD GLVCGYHGFK FAASGKCVRI PAQNSGANFE QPTYPLEERG TYTWIWMGDP
KLADPSSIPP YEDFGLDQPG WAVSGGYRLE INGRSQLLID NLMDLTHLPH VHHHVPGGDA
YLQSRHTLSE RPRSLRLTQE MPGTWSPFFE FLWGADQRFD GEVMLHQVTD FYGPEFVKTS
GPLIDFAQDG EGHLSTSHGI VYFLHGVTPA MAHSTHFFCA QTRNFRIDDD AFGQALHELD
EVIRMQDVVA INHVEPDVER SSQVQRELLA RSDRAAAAVR ERIKEMILAE QPSQASEPAP
ARDLAG
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