| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1540 |
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| Symbol | |
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| ID | 5198556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1713884 |
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| End bp | 1714843 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581088 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001262041 |
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| Protein GI | 148554459 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000047582 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00155056 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCTGC TCAACAGCGT GCTGCAATCG CTGAAGATCA TCGACAGTTC GCTTGGCATC
CTCGAGCTTG CGCCGCCGTG GGGCTTCCGG CGGGACACGA TCCCGAAGGA CATGGCGACG
TTCATTGCGC CGATGTCGGG AAGCTGCCTC GTTCGCCTCG ATGACGGCAC CACCGTCGAA
ATGAAGCCCG GCAACGCCGT GCTGATCCTC CGCGACGCAT TCGACATAGT GTCGGCGGAC
GGCAGCCCCA CCAAGTCCTT CGTCGAAAGT TGGACCGCCC AGGGGCTACC CGCCATGGGG
CCGCATATCG AGCGATCAGG CCCGGATTAT TTCTGCGCGA TCGACCATGA GCGCCCGGAC
GAGCATCGCG ACCGGCTGCT CGCTGTCGCC GTCCAGGCTG AGGACGTGGC GGAAAGCCCT
ATCCTCGGCG TGCTTCCGCA GATGATCAGC TTCGACGAAA AGGAGCTGGA GCCTGCCCTG
ATCGGCACCG TCGCCCAGTT CGTCGAGGCC GAGCATCGCC AACCCAATCC CGGCTACAAT
GCCACCGCCC AGCAGCTCGC CAATTTCCTG TTCATCGCGT TGGTCCGCAA CCATGTGCTC
TCCAACGGGA CCGACCGGGC AAGCTGGATC CGGGGCATGT CCGACCGCGC GATCGGACAT
GCCCTGAAGC TCATCCATCA AGCCTTCGAC AAGCCCTGGA GTCTGCAGAA CCTGGCGCGC
GCATCCGGCG TATCGCGGTC GGTCTTCGCC GCGCGCTTCA GGACGCTGGT CGGCCAGACG
CCGATGACCT ATCTCGCAGC GGTCCGGATG CATGCGGCGG CGCAGCTGCT GATCGACGGC
CAGCCGGTCT CCAATGTCTG CCAGCGGGTC GGCTATCGTT CCGAATGGGC GTTCCGAAAG
GCCTTCCGCC AGCAGTTCGG GATGATGCCC GCCCGCTATG GAAAGTCGCT GCGCGGCTGA
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| Protein sequence | MDLLNSVLQS LKIIDSSLGI LELAPPWGFR RDTIPKDMAT FIAPMSGSCL VRLDDGTTVE
MKPGNAVLIL RDAFDIVSAD GSPTKSFVES WTAQGLPAMG PHIERSGPDY FCAIDHERPD
EHRDRLLAVA VQAEDVAESP ILGVLPQMIS FDEKELEPAL IGTVAQFVEA EHRQPNPGYN
ATAQQLANFL FIALVRNHVL SNGTDRASWI RGMSDRAIGH ALKLIHQAFD KPWSLQNLAR
ASGVSRSVFA ARFRTLVGQT PMTYLAAVRM HAAAQLLIDG QPVSNVCQRV GYRSEWAFRK
AFRQQFGMMP ARYGKSLRG
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